RIMM_GLOVI
ID RIMM_GLOVI Reviewed; 181 AA.
AC Q7NKH3;
DT 29-MAR-2004, integrated into UniProtKB/Swiss-Prot.
DT 15-DEC-2003, sequence version 1.
DT 25-MAY-2022, entry version 92.
DE RecName: Full=Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014};
GN Name=rimM {ECO:0000255|HAMAP-Rule:MF_00014}; OrderedLocusNames=gll1505;
OS Gloeobacter violaceus (strain ATCC 29082 / PCC 7421).
OC Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacteraceae;
OC Gloeobacter.
OX NCBI_TaxID=251221;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29082 / PCC 7421;
RX PubMed=14621292; DOI=10.1093/dnares/10.4.137;
RA Nakamura Y., Kaneko T., Sato S., Mimuro M., Miyashita H., Tsuchiya T.,
RA Sasamoto S., Watanabe A., Kawashima K., Kishida Y., Kiyokawa C., Kohara M.,
RA Matsumoto M., Matsuno A., Nakazaki N., Shimpo S., Takeuchi C., Yamada M.,
RA Tabata S.;
RT "Complete genome structure of Gloeobacter violaceus PCC 7421, a
RT cyanobacterium that lacks thylakoids.";
RL DNA Res. 10:137-145(2003).
CC -!- FUNCTION: An accessory protein needed during the final step in the
CC assembly of 30S ribosomal subunit, possibly for assembly of the head
CC region. Probably interacts with S19. Essential for efficient processing
CC of 16S rRNA. May be needed both before and after RbfA during the
CC maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits
CC but not for 70S ribosomes. {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- SUBUNIT: Binds ribosomal protein S19. {ECO:0000255|HAMAP-
CC Rule:MF_00014}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- DOMAIN: The PRC barrel domain binds ribosomal protein S19.
CC {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- SIMILARITY: Belongs to the RimM family. {ECO:0000255|HAMAP-
CC Rule:MF_00014}.
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DR EMBL; BA000045; BAC89446.1; -; Genomic_DNA.
DR RefSeq; NP_924451.1; NC_005125.1.
DR RefSeq; WP_011141504.1; NC_005125.1.
DR AlphaFoldDB; Q7NKH3; -.
DR SMR; Q7NKH3; -.
DR STRING; 251221.35212070; -.
DR EnsemblBacteria; BAC89446; BAC89446; BAC89446.
DR KEGG; gvi:gll1505; -.
DR PATRIC; fig|251221.4.peg.1539; -.
DR eggNOG; COG0806; Bacteria.
DR HOGENOM; CLU_077636_3_1_3; -.
DR InParanoid; Q7NKH3; -.
DR OMA; DEFYHAD; -.
DR OrthoDB; 1497415at2; -.
DR PhylomeDB; Q7NKH3; -.
DR Proteomes; UP000000557; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005840; C:ribosome; IEA:InterPro.
DR GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR Gene3D; 2.40.30.60; -; 1.
DR HAMAP; MF_00014; Ribosome_mat_RimM; 1.
DR InterPro; IPR011961; 16S_RimM.
DR InterPro; IPR027275; PRC-brl_dom.
DR InterPro; IPR011033; PRC_barrel-like_sf.
DR InterPro; IPR002676; RimM_N.
DR InterPro; IPR036976; RimM_N_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR Pfam; PF05239; PRC; 1.
DR Pfam; PF01782; RimM; 1.
DR SUPFAM; SSF50346; SSF50346; 1.
DR SUPFAM; SSF50447; SSF50447; 1.
DR TIGRFAMs; TIGR02273; 16S_RimM; 1.
PE 3: Inferred from homology;
KW Chaperone; Cytoplasm; Reference proteome; Ribosome biogenesis.
FT CHAIN 1..181
FT /note="Ribosome maturation factor RimM"
FT /id="PRO_0000163295"
FT DOMAIN 97..170
FT /note="PRC barrel"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00014"
SQ SEQUENCE 181 AA; 19541 MW; 52246D7219D52E2E CRC64;
MQQWLEIGKV VAAQGLRGEV RVQPATDFAE RLTRPGARLV GRSLDDGRVF RLQSGRAIPG
KDLFVCRFEG VEERNAAEKL VGSTLWIGAA ERPVLAAGEF WLPDLMGVRV FRQDTGEAIG
EVSDMTRAGN DLLVIRLSGG KTVMVPFVHA LVPVVDLEAG RIEVVAIPGL LDPEAAEADE
A