RIMM_HAEIN
ID RIMM_HAEIN Reviewed; 178 AA.
AC P44568;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 1.
DT 25-MAY-2022, entry version 115.
DE RecName: Full=Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014};
GN Name=rimM {ECO:0000255|HAMAP-Rule:MF_00014}; OrderedLocusNames=HI_0203;
OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
OC Pasteurellaceae; Haemophilus.
OX NCBI_TaxID=71421;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51907 / DSM 11121 / KW20 / Rd;
RX PubMed=7542800; DOI=10.1126/science.7542800;
RA Fleischmann R.D., Adams M.D., White O., Clayton R.A., Kirkness E.F.,
RA Kerlavage A.R., Bult C.J., Tomb J.-F., Dougherty B.A., Merrick J.M.,
RA McKenney K., Sutton G.G., FitzHugh W., Fields C.A., Gocayne J.D.,
RA Scott J.D., Shirley R., Liu L.-I., Glodek A., Kelley J.M., Weidman J.F.,
RA Phillips C.A., Spriggs T., Hedblom E., Cotton M.D., Utterback T.R.,
RA Hanna M.C., Nguyen D.T., Saudek D.M., Brandon R.C., Fine L.D.,
RA Fritchman J.L., Fuhrmann J.L., Geoghagen N.S.M., Gnehm C.L., McDonald L.A.,
RA Small K.V., Fraser C.M., Smith H.O., Venter J.C.;
RT "Whole-genome random sequencing and assembly of Haemophilus influenzae
RT Rd.";
RL Science 269:496-512(1995).
CC -!- FUNCTION: An accessory protein needed during the final step in the
CC assembly of 30S ribosomal subunit, possibly for assembly of the head
CC region. Probably interacts with S19. Essential for efficient processing
CC of 16S rRNA. May be needed both before and after RbfA during the
CC maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits
CC but not for 70S ribosomes. {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- SUBUNIT: Binds ribosomal protein S19. {ECO:0000255|HAMAP-
CC Rule:MF_00014}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- DOMAIN: The PRC barrel domain binds ribosomal protein S19.
CC {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- SIMILARITY: Belongs to the RimM family. {ECO:0000255|HAMAP-
CC Rule:MF_00014}.
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DR EMBL; L42023; AAC21872.1; -; Genomic_DNA.
DR PIR; D64145; D64145.
DR RefSeq; NP_438372.2; NC_000907.1.
DR PDB; 3H9N; X-ray; 2.70 A; A=8-178.
DR PDBsum; 3H9N; -.
DR AlphaFoldDB; P44568; -.
DR SMR; P44568; -.
DR STRING; 71421.HI_0203; -.
DR EnsemblBacteria; AAC21872; AAC21872; HI_0203.
DR KEGG; hin:HI_0203; -.
DR PATRIC; fig|71421.8.peg.208; -.
DR eggNOG; COG0806; Bacteria.
DR HOGENOM; CLU_077636_1_0_6; -.
DR OMA; DEFYHAD; -.
DR PhylomeDB; P44568; -.
DR EvolutionaryTrace; P44568; -.
DR Proteomes; UP000000579; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005840; C:ribosome; IEA:InterPro.
DR GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR Gene3D; 2.40.30.60; -; 1.
DR HAMAP; MF_00014; Ribosome_mat_RimM; 1.
DR InterPro; IPR011961; 16S_RimM.
DR InterPro; IPR027275; PRC-brl_dom.
DR InterPro; IPR011033; PRC_barrel-like_sf.
DR InterPro; IPR002676; RimM_N.
DR InterPro; IPR036976; RimM_N_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR Pfam; PF05239; PRC; 1.
DR Pfam; PF01782; RimM; 1.
DR SUPFAM; SSF50346; SSF50346; 1.
DR SUPFAM; SSF50447; SSF50447; 1.
DR TIGRFAMs; TIGR02273; 16S_RimM; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Chaperone; Cytoplasm; Reference proteome;
KW Ribosome biogenesis.
FT CHAIN 1..178
FT /note="Ribosome maturation factor RimM"
FT /id="PRO_0000163297"
FT DOMAIN 99..178
FT /note="PRC barrel"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00014"
FT STRAND 9..18
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 20..23
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 25..29
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 31..34
FT /evidence="ECO:0007829|PDB:3H9N"
FT HELIX 35..39
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 42..47
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 50..54
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 56..64
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 66..72
FT /evidence="ECO:0007829|PDB:3H9N"
FT HELIX 76..80
FT /evidence="ECO:0007829|PDB:3H9N"
FT TURN 81..84
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 86..90
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 98..100
FT /evidence="ECO:0007829|PDB:3H9N"
FT HELIX 102..106
FT /evidence="ECO:0007829|PDB:3H9N"
FT TURN 107..109
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 111..114
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 119..131
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 133..138
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 148..153
FT /evidence="ECO:0007829|PDB:3H9N"
FT TURN 157..159
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 160..164
FT /evidence="ECO:0007829|PDB:3H9N"
FT HELIX 165..167
FT /evidence="ECO:0007829|PDB:3H9N"
FT STRAND 169..172
FT /evidence="ECO:0007829|PDB:3H9N"
SQ SEQUENCE 178 AA; 20571 MW; 59A5B0F334F9EAE1 CRC64;
MKNMEQQHIE VVGKLGSTYG IRGWLRIYSS TEQAESIFDY QPWFLKIKGE WQSIELENWR
YHNHEIIVKL KGVDDREAAQ ILANVEIGVD LSVFPELEEG DYYWHDLIGC TVVNLEGYTM
GTVTEMMETG SNDVLVVKAN TKDAFGKQER LIPFLYEQVV KRVDLTTKTI EVDWDAGF
