RIMM_NOSS1
ID RIMM_NOSS1 Reviewed; 246 AA.
AC Q8YTB1;
DT 06-JUN-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2002, sequence version 1.
DT 25-MAY-2022, entry version 92.
DE RecName: Full=Probable 16S rRNA-processing protein RimM;
GN Name=rimM {ECO:0000255|HAMAP-Rule:MF_00014}; OrderedLocusNames=alr2812;
OS Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576).
OC Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.
OX NCBI_TaxID=103690;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PCC 7120 / SAG 25.82 / UTEX 2576;
RX PubMed=11759840; DOI=10.1093/dnares/8.5.205;
RA Kaneko T., Nakamura Y., Wolk C.P., Kuritz T., Sasamoto S., Watanabe A.,
RA Iriguchi M., Ishikawa A., Kawashima K., Kimura T., Kishida Y., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakazaki N., Shimpo S., Sugimoto M.,
RA Takazawa M., Yamada M., Yasuda M., Tabata S.;
RT "Complete genomic sequence of the filamentous nitrogen-fixing
RT cyanobacterium Anabaena sp. strain PCC 7120.";
RL DNA Res. 8:205-213(2001).
CC -!- FUNCTION: Essential for efficient processing of 16S rRNA. Probably part
CC of the 30S subunit prior to or during the final step in the processing
CC of 16S free 30S ribosomal subunits. It could be some accessory protein
CC needed for efficient assembly of the 30S subunit. It is needed in a
CC step prior to RbfA during the maturation of 16S rRNA. It has affinity
CC for free ribosomal 30S subunits but not for 70S ribosomes (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- SIMILARITY: Belongs to the RimM family. {ECO:0000255|HAMAP-
CC Rule:MF_00014}.
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DR EMBL; BA000019; BAB74511.1; -; Genomic_DNA.
DR PIR; AE2157; AE2157.
DR RefSeq; WP_010996963.1; NZ_RSCN01000003.1.
DR AlphaFoldDB; Q8YTB1; -.
DR SMR; Q8YTB1; -.
DR STRING; 103690.17131905; -.
DR EnsemblBacteria; BAB74511; BAB74511; BAB74511.
DR KEGG; ana:alr2812; -.
DR eggNOG; COG0806; Bacteria.
DR OMA; DEFYHAD; -.
DR OrthoDB; 1497415at2; -.
DR Proteomes; UP000002483; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005840; C:ribosome; IEA:InterPro.
DR GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 2.40.30.60; -; 1.
DR HAMAP; MF_00014; Ribosome_mat_RimM; 1.
DR InterPro; IPR011961; 16S_RimM.
DR InterPro; IPR027275; PRC-brl_dom.
DR InterPro; IPR011033; PRC_barrel-like_sf.
DR InterPro; IPR002676; RimM_N.
DR InterPro; IPR036976; RimM_N_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR Pfam; PF05239; PRC; 1.
DR Pfam; PF01782; RimM; 1.
DR SUPFAM; SSF50346; SSF50346; 1.
DR SUPFAM; SSF50447; SSF50447; 1.
DR TIGRFAMs; TIGR02273; 16S_RimM; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Reference proteome; rRNA processing.
FT CHAIN 1..246
FT /note="Probable 16S rRNA-processing protein RimM"
FT /id="PRO_0000163242"
FT REGION 1..63
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 246 AA; 26921 MW; 42BA464F0F4062C0 CRC64;
MKRKQESKGA GEKRQGAGGR GQGEKKQGKQ GRQGRQGRQG EKSPVPSPQS PIPNPQFTTP
NPDEWLQIGK IVSAQGLSGE VRVYPDSDFP ERFEVPGTRW LLRPGQTEPQ PIELLHGRYL
ENKNLYVLQL AGVENRSQSE ELRGCMLFVP ASDRPELGED EYHVVDLIGM EVFLQASGDL
VGAVVDVIPA GNDLLEVSLH EPVTSDKKPK TVLIPFVKAI APVVDLQTRR IEITPPPGLL
ELGSGV