RIMM_SHEB5
ID RIMM_SHEB5 Reviewed; 176 AA.
AC A3D1W6;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 20-MAR-2007, sequence version 1.
DT 25-MAY-2022, entry version 70.
DE RecName: Full=Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014};
GN Name=rimM {ECO:0000255|HAMAP-Rule:MF_00014}; OrderedLocusNames=Sbal_1211;
OS Shewanella baltica (strain OS155 / ATCC BAA-1091).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=325240;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OS155 / ATCC BAA-1091;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Brettar I.,
RA Klappenbach J., Konstantinidis K., Rodrigues J., Tiedje J., Richardson P.;
RT "Complete sequence of chromosome of Shewanella baltica OS155.";
RL Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: An accessory protein needed during the final step in the
CC assembly of 30S ribosomal subunit, possibly for assembly of the head
CC region. Probably interacts with S19. Essential for efficient processing
CC of 16S rRNA. May be needed both before and after RbfA during the
CC maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits
CC but not for 70S ribosomes. {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- SUBUNIT: Binds ribosomal protein S19. {ECO:0000255|HAMAP-
CC Rule:MF_00014}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- DOMAIN: The PRC barrel domain binds ribosomal protein S19.
CC {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- SIMILARITY: Belongs to the RimM family. {ECO:0000255|HAMAP-
CC Rule:MF_00014}.
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DR EMBL; CP000563; ABN60729.1; -; Genomic_DNA.
DR RefSeq; WP_006080789.1; NC_009052.1.
DR AlphaFoldDB; A3D1W6; -.
DR SMR; A3D1W6; -.
DR STRING; 325240.Sbal_1211; -.
DR EnsemblBacteria; ABN60729; ABN60729; Sbal_1211.
DR GeneID; 11771556; -.
DR KEGG; sbl:Sbal_1211; -.
DR HOGENOM; CLU_077636_1_0_6; -.
DR OMA; DEFYHAD; -.
DR Proteomes; UP000001557; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005840; C:ribosome; IEA:InterPro.
DR GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR Gene3D; 2.40.30.60; -; 1.
DR HAMAP; MF_00014; Ribosome_mat_RimM; 1.
DR InterPro; IPR011961; 16S_RimM.
DR InterPro; IPR027275; PRC-brl_dom.
DR InterPro; IPR011033; PRC_barrel-like_sf.
DR InterPro; IPR002676; RimM_N.
DR InterPro; IPR036976; RimM_N_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR Pfam; PF05239; PRC; 1.
DR Pfam; PF01782; RimM; 1.
DR SUPFAM; SSF50346; SSF50346; 1.
DR SUPFAM; SSF50447; SSF50447; 1.
DR TIGRFAMs; TIGR02273; 16S_RimM; 1.
PE 3: Inferred from homology;
KW Chaperone; Cytoplasm; Ribosome biogenesis.
FT CHAIN 1..176
FT /note="Ribosome maturation factor RimM"
FT /id="PRO_0000321753"
FT DOMAIN 97..176
FT /note="PRC barrel"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00014"
SQ SEQUENCE 176 AA; 19932 MW; 4860BB2BC53B45B3 CRC64;
MSSNQQPVVL GKLGSCHGIK GWLKITAYTD SVEGIFDYSP WLIKENGEWR EIKVTQWRYQ
GKAVVALLDG VETREQAQML TNCEIAILPE QMNDLPADEF YWRDLIGCEV VNTTGYNMGI
VDQIVETGSN DVLLVKANAK DSFGKVERMI PFVPEQFIKT VDLQGKQILV DWDPDF