RIMM_TRIV2
ID RIMM_TRIV2 Reviewed; 233 AA.
AC Q3ME71;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 25-OCT-2005, sequence version 1.
DT 25-MAY-2022, entry version 82.
DE RecName: Full=Probable 16S rRNA-processing protein RimM;
GN Name=rimM {ECO:0000255|HAMAP-Rule:MF_00014}; OrderedLocusNames=Ava_1091;
OS Trichormus variabilis (strain ATCC 29413 / PCC 7937) (Anabaena variabilis).
OC Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Trichormus.
OX NCBI_TaxID=240292;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29413 / PCC 7937;
RX PubMed=25197444; DOI=10.4056/sigs.3899418;
RA Thiel T., Pratte B.S., Zhong J., Goodwin L., Copeland A., Lucas S., Han C.,
RA Pitluck S., Land M.L., Kyrpides N.C., Woyke T.;
RT "Complete genome sequence of Anabaena variabilis ATCC 29413.";
RL Stand. Genomic Sci. 9:562-573(2014).
CC -!- FUNCTION: Essential for efficient processing of 16S rRNA. Probably part
CC of the 30S subunit prior to or during the final step in the processing
CC of 16S free 30S ribosomal subunits. It could be some accessory protein
CC needed for efficient assembly of the 30S subunit. It is needed in a
CC step prior to RbfA during the maturation of 16S rRNA. It has affinity
CC for free ribosomal 30S subunits but not for 70S ribosomes (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- SIMILARITY: Belongs to the RimM family. {ECO:0000255|HAMAP-
CC Rule:MF_00014}.
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DR EMBL; CP000117; ABA20715.1; -; Genomic_DNA.
DR AlphaFoldDB; Q3ME71; -.
DR SMR; Q3ME71; -.
DR STRING; 240292.Ava_1091; -.
DR EnsemblBacteria; ABA20715; ABA20715; Ava_1091.
DR KEGG; ava:Ava_1091; -.
DR eggNOG; COG0806; Bacteria.
DR HOGENOM; CLU_077636_3_0_3; -.
DR OMA; DEFYHAD; -.
DR Proteomes; UP000002533; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005840; C:ribosome; IEA:InterPro.
DR GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 2.40.30.60; -; 1.
DR HAMAP; MF_00014; Ribosome_mat_RimM; 1.
DR InterPro; IPR011961; 16S_RimM.
DR InterPro; IPR027275; PRC-brl_dom.
DR InterPro; IPR011033; PRC_barrel-like_sf.
DR InterPro; IPR002676; RimM_N.
DR InterPro; IPR036976; RimM_N_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR Pfam; PF05239; PRC; 1.
DR Pfam; PF01782; RimM; 1.
DR SUPFAM; SSF50346; SSF50346; 1.
DR SUPFAM; SSF50447; SSF50447; 1.
DR TIGRFAMs; TIGR02273; 16S_RimM; 1.
PE 3: Inferred from homology;
KW Cytoplasm; rRNA processing.
FT CHAIN 1..233
FT /note="Probable 16S rRNA-processing protein RimM"
FT /id="PRO_0000244108"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 233 AA; 25369 MW; 3B18352659C671A5 CRC64;
MKRKQDSKGA GSRGQGAGEK KQGAGGRGQG EKKQKKSPVP SPQSPVPDPD EWLQIGKIVS
AQGLSGEVRV YPDSDFPERF EVPGTRWLLR PGQTEPQPIE LLHGRYLENK NLYVLQLAGV
ENRTQSEELR GCMLFVPASD RPELGEDEYH VVDLIGMEVF LQTSGDLVGT VVDVIPAGND
LLEVSLHEPV PSDKKPKTVL IPFVKAIAPV VDLETRRIEI TPPPGLLELG SGV