RIMM_VIBA3
ID RIMM_VIBA3 Reviewed; 184 AA.
AC B7VK28;
DT 28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 10-FEB-2009, sequence version 1.
DT 25-MAY-2022, entry version 63.
DE RecName: Full=Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014};
GN Name=rimM {ECO:0000255|HAMAP-Rule:MF_00014}; OrderedLocusNames=VS_2557;
OS Vibrio atlanticus (strain LGP32) (Vibrio splendidus (strain Mel32)).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=575788;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LGP32;
RA Mazel D., Le Roux F.;
RT "Vibrio splendidus str. LGP32 complete genome.";
RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: An accessory protein needed during the final step in the
CC assembly of 30S ribosomal subunit, possibly for assembly of the head
CC region. Probably interacts with S19. Essential for efficient processing
CC of 16S rRNA. May be needed both before and after RbfA during the
CC maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits
CC but not for 70S ribosomes. {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- SUBUNIT: Binds ribosomal protein S19. {ECO:0000255|HAMAP-
CC Rule:MF_00014}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- DOMAIN: The PRC barrel domain binds ribosomal protein S19.
CC {ECO:0000255|HAMAP-Rule:MF_00014}.
CC -!- SIMILARITY: Belongs to the RimM family. {ECO:0000255|HAMAP-
CC Rule:MF_00014}.
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DR EMBL; FM954972; CAV19735.1; -; Genomic_DNA.
DR RefSeq; WP_009847609.1; NC_011753.2.
DR AlphaFoldDB; B7VK28; -.
DR SMR; B7VK28; -.
DR STRING; 575788.VS_2557; -.
DR EnsemblBacteria; CAV19735; CAV19735; VS_2557.
DR KEGG; vsp:VS_2557; -.
DR eggNOG; COG0806; Bacteria.
DR HOGENOM; CLU_077636_1_0_6; -.
DR OMA; DEFYHAD; -.
DR OrthoDB; 1497415at2; -.
DR Proteomes; UP000009100; Chromosome 1.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005840; C:ribosome; IEA:InterPro.
DR GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR Gene3D; 2.40.30.60; -; 1.
DR HAMAP; MF_00014; Ribosome_mat_RimM; 1.
DR InterPro; IPR011961; 16S_RimM.
DR InterPro; IPR027275; PRC-brl_dom.
DR InterPro; IPR011033; PRC_barrel-like_sf.
DR InterPro; IPR002676; RimM_N.
DR InterPro; IPR036976; RimM_N_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR Pfam; PF05239; PRC; 1.
DR Pfam; PF01782; RimM; 1.
DR SUPFAM; SSF50346; SSF50346; 1.
DR SUPFAM; SSF50447; SSF50447; 1.
DR TIGRFAMs; TIGR02273; 16S_RimM; 1.
PE 3: Inferred from homology;
KW Chaperone; Cytoplasm; Reference proteome; Ribosome biogenesis.
FT CHAIN 1..184
FT /note="Ribosome maturation factor RimM"
FT /id="PRO_1000116589"
FT DOMAIN 104..184
FT /note="PRC barrel"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00014"
SQ SEQUENCE 184 AA; 21374 MW; 2E488EE196C74A7D CRC64;
MSMKGKETMS EQNERIVMGK LGSTYGIRGW LKVFSYTDNA ESIFDYSPWY LKLKGEWVEY
KVESWKRHGQ GYVCKLAGLD VREDAQLMTN FEIAIDPASL PELSEDEFYW RELFGMQVFT
TKGYNLGEVT DLLETGSNDV LVIKANLKDA FGQKERLIPY LEEQVIKKVD REARRIEVDW
DPGF