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RIMP_AFIC5
ID   RIMP_AFIC5              Reviewed;         260 AA.
AC   B6JCS7; F8BZM4;
DT   14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT   16-DEC-2008, sequence version 1.
DT   25-MAY-2022, entry version 73.
DE   RecName: Full=Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077};
GN   Name=rimP {ECO:0000255|HAMAP-Rule:MF_01077};
GN   OrderedLocusNames=OCAR_4512, OCA5_c00240;
OS   Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5)
OS   (Oligotropha carboxidovorans).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC   Bradyrhizobiaceae; Afipia.
OX   NCBI_TaxID=504832;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 49405 / DSM 1227 / KCTC 32145 / OM5;
RX   PubMed=18539730; DOI=10.1128/jb.00614-08;
RA   Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.;
RT   "Genome sequence of the chemolithoautotrophic bacterium Oligotropha
RT   carboxidovorans OM5T.";
RL   J. Bacteriol. 190:5531-5532(2008).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 49405 / DSM 1227 / KCTC 32145 / OM5;
RX   PubMed=21742883; DOI=10.1128/jb.05619-11;
RA   Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G.,
RA   Meyer O.;
RT   "Complete genome sequences of the chemolithoautotrophic Oligotropha
RT   carboxidovorans strains OM4 and OM5.";
RL   J. Bacteriol. 193:5043-5043(2011).
CC   -!- FUNCTION: Required for maturation of 30S ribosomal subunits.
CC       {ECO:0000255|HAMAP-Rule:MF_01077}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01077}.
CC   -!- SIMILARITY: Belongs to the RimP family. {ECO:0000255|HAMAP-
CC       Rule:MF_01077}.
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DR   EMBL; CP001196; ACI91657.1; -; Genomic_DNA.
DR   EMBL; CP002826; AEI04758.1; -; Genomic_DNA.
DR   RefSeq; WP_012561688.1; NC_015684.1.
DR   AlphaFoldDB; B6JCS7; -.
DR   SMR; B6JCS7; -.
DR   STRING; 504832.OCAR_4512; -.
DR   EnsemblBacteria; AEI04758; AEI04758; OCA5_c00240.
DR   KEGG; oca:OCAR_4512; -.
DR   KEGG; ocg:OCA5_c00240; -.
DR   PATRIC; fig|504832.7.peg.26; -.
DR   eggNOG; COG0779; Bacteria.
DR   HOGENOM; CLU_070525_0_0_5; -.
DR   OMA; PMVRKSD; -.
DR   OrthoDB; 1595498at2; -.
DR   Proteomes; UP000007730; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR   CDD; cd01734; YlxS_C; 1.
DR   Gene3D; 3.30.300.70; -; 1.
DR   HAMAP; MF_01077; RimP; 1.
DR   InterPro; IPR003728; Ribosome_maturation_RimP.
DR   InterPro; IPR028998; RimP_C.
DR   InterPro; IPR036847; RimP_C_sf.
DR   InterPro; IPR028989; RimP_N.
DR   InterPro; IPR035956; RimP_N_sf.
DR   PANTHER; PTHR33867; PTHR33867; 1.
DR   Pfam; PF02576; DUF150; 1.
DR   Pfam; PF17384; DUF150_C; 1.
DR   SUPFAM; SSF74942; SSF74942; 1.
DR   SUPFAM; SSF75420; SSF75420; 1.
PE   3: Inferred from homology;
KW   Cytoplasm; Reference proteome; Ribosome biogenesis.
FT   CHAIN           1..260
FT                   /note="Ribosome maturation factor RimP"
FT                   /id="PRO_1000136783"
FT   REGION          189..260
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        212..260
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   260 AA;  28518 MW;  29B6FF218CEDDE3B CRC64;
     MTEPAFFPET ATSTAEPRLV VEPGVAARVA AIAEPVLEGL GYRLVRIKIS GEAGCTVQIM
     AERPDGTMLI DDCEAVSKAL SPVMDVADPI QRAYRLEISS PGIDRPLVRQ SDFERYTGHL
     VKIEMAAPHE GRKRFRGTLQ GIEDNLVRIT RDDAKSHEGA QPADARLPLA DIASAHLVLT
     DQLIAESMRR GRDAEREQLE NAGVLPPPPP HAKKAREMRD KAGPRKEKTA KKPLPKNTKA
     HRLAADAKRR QTTSDPHQGE
 
 
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