RIMP_AFIC5
ID RIMP_AFIC5 Reviewed; 260 AA.
AC B6JCS7; F8BZM4;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 1.
DT 25-MAY-2022, entry version 73.
DE RecName: Full=Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077};
GN Name=rimP {ECO:0000255|HAMAP-Rule:MF_01077};
GN OrderedLocusNames=OCAR_4512, OCA5_c00240;
OS Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5)
OS (Oligotropha carboxidovorans).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Bradyrhizobiaceae; Afipia.
OX NCBI_TaxID=504832;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49405 / DSM 1227 / KCTC 32145 / OM5;
RX PubMed=18539730; DOI=10.1128/jb.00614-08;
RA Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.;
RT "Genome sequence of the chemolithoautotrophic bacterium Oligotropha
RT carboxidovorans OM5T.";
RL J. Bacteriol. 190:5531-5532(2008).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49405 / DSM 1227 / KCTC 32145 / OM5;
RX PubMed=21742883; DOI=10.1128/jb.05619-11;
RA Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G.,
RA Meyer O.;
RT "Complete genome sequences of the chemolithoautotrophic Oligotropha
RT carboxidovorans strains OM4 and OM5.";
RL J. Bacteriol. 193:5043-5043(2011).
CC -!- FUNCTION: Required for maturation of 30S ribosomal subunits.
CC {ECO:0000255|HAMAP-Rule:MF_01077}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01077}.
CC -!- SIMILARITY: Belongs to the RimP family. {ECO:0000255|HAMAP-
CC Rule:MF_01077}.
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DR EMBL; CP001196; ACI91657.1; -; Genomic_DNA.
DR EMBL; CP002826; AEI04758.1; -; Genomic_DNA.
DR RefSeq; WP_012561688.1; NC_015684.1.
DR AlphaFoldDB; B6JCS7; -.
DR SMR; B6JCS7; -.
DR STRING; 504832.OCAR_4512; -.
DR EnsemblBacteria; AEI04758; AEI04758; OCA5_c00240.
DR KEGG; oca:OCAR_4512; -.
DR KEGG; ocg:OCA5_c00240; -.
DR PATRIC; fig|504832.7.peg.26; -.
DR eggNOG; COG0779; Bacteria.
DR HOGENOM; CLU_070525_0_0_5; -.
DR OMA; PMVRKSD; -.
DR OrthoDB; 1595498at2; -.
DR Proteomes; UP000007730; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR CDD; cd01734; YlxS_C; 1.
DR Gene3D; 3.30.300.70; -; 1.
DR HAMAP; MF_01077; RimP; 1.
DR InterPro; IPR003728; Ribosome_maturation_RimP.
DR InterPro; IPR028998; RimP_C.
DR InterPro; IPR036847; RimP_C_sf.
DR InterPro; IPR028989; RimP_N.
DR InterPro; IPR035956; RimP_N_sf.
DR PANTHER; PTHR33867; PTHR33867; 1.
DR Pfam; PF02576; DUF150; 1.
DR Pfam; PF17384; DUF150_C; 1.
DR SUPFAM; SSF74942; SSF74942; 1.
DR SUPFAM; SSF75420; SSF75420; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Reference proteome; Ribosome biogenesis.
FT CHAIN 1..260
FT /note="Ribosome maturation factor RimP"
FT /id="PRO_1000136783"
FT REGION 189..260
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 212..260
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 260 AA; 28518 MW; 29B6FF218CEDDE3B CRC64;
MTEPAFFPET ATSTAEPRLV VEPGVAARVA AIAEPVLEGL GYRLVRIKIS GEAGCTVQIM
AERPDGTMLI DDCEAVSKAL SPVMDVADPI QRAYRLEISS PGIDRPLVRQ SDFERYTGHL
VKIEMAAPHE GRKRFRGTLQ GIEDNLVRIT RDDAKSHEGA QPADARLPLA DIASAHLVLT
DQLIAESMRR GRDAEREQLE NAGVLPPPPP HAKKAREMRD KAGPRKEKTA KKPLPKNTKA
HRLAADAKRR QTTSDPHQGE