ID   RIMP_MYCS2              Reviewed;         181 AA.
AC   A0QVM3; I7FBX3;
DT   22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT   09-JAN-2007, sequence version 1.
DT   25-MAY-2022, entry version 89.
DE   RecName: Full=Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077};
GN   Name=rimP {ECO:0000255|HAMAP-Rule:MF_01077};
GN   OrderedLocusNames=MSMEG_2624, MSMEI_2562;
OS   Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium
OS   smegmatis).
OC   Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC   Mycolicibacterium.
OX   NCBI_TaxID=246196;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700084 / mc(2)155;
RA   Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C.,
RA   Fraser C.M.;
RL   Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700084 / mc(2)155;
RX   PubMed=17295914; DOI=10.1186/gb-2007-8-2-r20;
RA   Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C.,
RA   Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.;
RT   "Interrupted coding sequences in Mycobacterium smegmatis: authentic
RT   mutations or sequencing errors?";
RL   Genome Biol. 8:R20.1-R20.9(2007).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700084 / mc(2)155;
RX   PubMed=18955433; DOI=10.1101/gr.081901.108;
RA   Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M.,
RA   Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.;
RT   "Ortho-proteogenomics: multiple proteomes investigation through orthology
RT   and a new MS-based protocol.";
RL   Genome Res. 19:128-135(2009).
CC   -!- FUNCTION: Required for maturation of 30S ribosomal subunits.
CC       {ECO:0000255|HAMAP-Rule:MF_01077}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01077}.
CC   -!- SIMILARITY: Belongs to the RimP family. {ECO:0000255|HAMAP-
CC       Rule:MF_01077}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AFP39030.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR   EMBL; CP000480; ABK75695.1; -; Genomic_DNA.
DR   EMBL; CP001663; AFP39030.1; ALT_INIT; Genomic_DNA.
DR   RefSeq; WP_011728481.1; NZ_SIJM01000029.1.
DR   RefSeq; YP_886961.1; NC_008596.1.
DR   PDB; 5GL6; X-ray; 2.20 A; A/B=1-181.
DR   PDBsum; 5GL6; -.
DR   AlphaFoldDB; A0QVM3; -.
DR   SMR; A0QVM3; -.
DR   STRING; 246196.MSMEI_2562; -.
DR   EnsemblBacteria; ABK75695; ABK75695; MSMEG_2624.
DR   EnsemblBacteria; AFP39030; AFP39030; MSMEI_2562.
DR   GeneID; 66734034; -.
DR   KEGG; msg:MSMEI_2562; -.
DR   KEGG; msm:MSMEG_2624; -.
DR   PATRIC; fig|246196.19.peg.2590; -.
DR   eggNOG; COG0779; Bacteria.
DR   OMA; TEHRHYV; -.
DR   OrthoDB; 1595498at2; -.
DR   Proteomes; UP000000757; Chromosome.
DR   Proteomes; UP000006158; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR   CDD; cd01734; YlxS_C; 1.
DR   Gene3D; 3.30.300.70; -; 1.
DR   HAMAP; MF_01077; RimP; 1.
DR   InterPro; IPR003728; Ribosome_maturation_RimP.
DR   InterPro; IPR028998; RimP_C.
DR   InterPro; IPR036847; RimP_C_sf.
DR   InterPro; IPR028989; RimP_N.
DR   InterPro; IPR035956; RimP_N_sf.
DR   PANTHER; PTHR33867; PTHR33867; 1.
DR   Pfam; PF02576; DUF150; 1.
DR   Pfam; PF17384; DUF150_C; 1.
DR   SUPFAM; SSF74942; SSF74942; 1.
DR   SUPFAM; SSF75420; SSF75420; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Cytoplasm; Reference proteome; Ribosome biogenesis.
FT   CHAIN           1..181
FT                   /note="Ribosome maturation factor RimP"
FT                   /id="PRO_0000384710"
FT   HELIX           15..28
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   STRAND          32..39
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   STRAND          41..52
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   HELIX           59..74
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   STRAND          83..88
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   HELIX           99..104
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   TURN            105..107
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   STRAND          109..114
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   STRAND          119..128
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   STRAND          131..138
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   STRAND          141..148
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   HELIX           149..151
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   STRAND          152..157
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   HELIX           166..173
FT                   /evidence="ECO:0007829|PDB:5GL6"
FT   STRAND          175..177
FT                   /evidence="ECO:0007829|PDB:5GL6"
SQ   SEQUENCE   181 AA;  19344 MW;  9BEA44A073F7F9E9 CRC64;
     MAPDPKLPSA DLPSQKQVIE LLDGEFARAG YEIDDVVVNA ATRPARITIV ADGDKGLDLD
     AVAMLSRLAS GLLDTVDTGD TPYVLEVTSP GVDRPLTTEK HFRRARGRKA ELSLADGSSL
     TARLGGTDGD QVNVVVAQGK DFAVRQIPLR EITKAVVQVE FSPPNRRELE LAEQTGKGAR
     A