RIMP_VARPS
ID RIMP_VARPS Reviewed; 212 AA.
AC C5CLW1;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 28-JUL-2009, sequence version 1.
DT 25-MAY-2022, entry version 62.
DE RecName: Full=Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077};
GN Name=rimP {ECO:0000255|HAMAP-Rule:MF_01077}; OrderedLocusNames=Vapar_2746;
OS Variovorax paradoxus (strain S110).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=543728;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S110;
RX PubMed=21183664; DOI=10.1128/jb.00925-10;
RA Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G.,
RA O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C.,
RA Ovchinnikova G., Goodwin L., Han C.;
RT "Complete genome sequence of the metabolically versatile plant growth-
RT promoting endophyte, Variovorax paradoxus S110.";
RL J. Bacteriol. 193:1183-1190(2011).
CC -!- FUNCTION: Required for maturation of 30S ribosomal subunits.
CC {ECO:0000255|HAMAP-Rule:MF_01077}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01077}.
CC -!- SIMILARITY: Belongs to the RimP family. {ECO:0000255|HAMAP-
CC Rule:MF_01077}.
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DR EMBL; CP001635; ACS19368.1; -; Genomic_DNA.
DR RefSeq; WP_012747850.1; NC_012791.1.
DR AlphaFoldDB; C5CLW1; -.
DR SMR; C5CLW1; -.
DR STRING; 543728.Vapar_2746; -.
DR EnsemblBacteria; ACS19368; ACS19368; Vapar_2746.
DR GeneID; 45057014; -.
DR KEGG; vap:Vapar_2746; -.
DR eggNOG; COG0779; Bacteria.
DR HOGENOM; CLU_070525_1_0_4; -.
DR OMA; YIHVSLY; -.
DR OrthoDB; 1595498at2; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR CDD; cd01734; YlxS_C; 1.
DR Gene3D; 3.30.300.70; -; 1.
DR HAMAP; MF_01077; RimP; 1.
DR InterPro; IPR003728; Ribosome_maturation_RimP.
DR InterPro; IPR028998; RimP_C.
DR InterPro; IPR036847; RimP_C_sf.
DR InterPro; IPR028989; RimP_N.
DR InterPro; IPR035956; RimP_N_sf.
DR PANTHER; PTHR33867; PTHR33867; 1.
DR Pfam; PF02576; DUF150; 1.
DR SUPFAM; SSF74942; SSF74942; 1.
DR SUPFAM; SSF75420; SSF75420; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Ribosome biogenesis.
FT CHAIN 1..212
FT /note="Ribosome maturation factor RimP"
FT /id="PRO_1000213501"
SQ SEQUENCE 212 AA; 22920 MW; 4E6388710798E551 CRC64;
MALQQTVEQT VAGLGYDLVE IERSAGGLLR VTIDLPWTAP TSEAVAAGIP EPFVTVEDCE
KVTRQLQFAL EVDGVDYKRL EVSSPGIDRP LRNEQDFERF VGEVIDITLK APMGAAAAGQ
VSATRKKFRG TLERVAGADG APGWQIVWSD APEPKPGQKV SKKRAPAKLH ALGFVLDELR
DARLAPIVDF KGRKAKTQPG FSDIDDGTNV PD