RIN13_ARATH
ID RIN13_ARATH Reviewed; 430 AA.
AC Q9SK71;
DT 23-FEB-2022, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 128.
DE RecName: Full=RPM1 interacting protein 13 {ECO:0000303|PubMed:15722472};
GN Name=RIN13 {ECO:0000303|PubMed:15722472};
GN OrderedLocusNames=At2g20310 {ECO:0000312|Araport:AT2G20310};
GN ORFNames=F11A3.14 {ECO:0000312|EMBL:AAD21757.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA de los Reyes C., Quan R., Chen H., Bautista V., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP FUNCTION, DISRUPTION PHENOTYPE, AND INTERACTION WITH RPM1.
RC STRAIN=cv. Col-5, and cv. Columbia;
RX PubMed=15722472; DOI=10.1105/tpc.104.028720;
RA Al-Daoude A., de Torres Zabala M., Ko J.-H., Grant M.;
RT "RIN13 is a positive regulator of the plant disease resistance protein
RT RPM1.";
RL Plant Cell 17:1016-1028(2005).
RN [5]
RP FUNCTION, SUBCELLULAR LOCATION, AND INTERACTION WITH ARF1.
RX PubMed=32446355; DOI=10.1016/j.bbrc.2020.04.082;
RA Liu X., Liu H., Liu W.-C., Gao Z.;
RT "The nuclear localized RIN13 induces cell death through interacting with
RT ARF1.";
RL Biochem. Biophys. Res. Commun. 527:124-130(2020).
CC -!- FUNCTION: Resistance protein interactor which positively enhances RPM1-
CC mediated resistance to necrotrophic bacterial pathogens Pseudomonas
CC syringae pv. tomato DC3000 harboring type III effector protein AvrRpm1
CC or AvrB, but prevents the hypersensitive response (HR) controlled by
CC RPM1 (PubMed:15722472). Together with ARF1, promotes leaf senescence
CC and cell death, probably by facilitating the translocation of ARF1 into
CC the nucleus, and activates ROS-related enzymes (e.g. POD, CAT and SOD)
CC (PubMed:32446355). {ECO:0000269|PubMed:15722472,
CC ECO:0000269|PubMed:32446355}.
CC -!- SUBUNIT: Interacts with RPM1 (via its NB-ARC domain) (PubMed:15722472).
CC Binds to ARF1 in the nucleus (PubMed:32446355).
CC {ECO:0000269|PubMed:15722472, ECO:0000269|PubMed:32446355}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:32446355}.
CC -!- DISRUPTION PHENOTYPE: Normal hypersensitive response (HR) but impaired
CC ability to suppress bacterial growth upon infection by the necrotrophic
CC bacterial pathogens Pseudomonas syringae pv. tomato DC3000 harboring
CC type III effector protein AvrRpm1 or AvrB.
CC {ECO:0000269|PubMed:15722472}.
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DR EMBL; AC006569; AAD21757.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC06992.1; -; Genomic_DNA.
DR EMBL; BT033116; ACF20471.1; -; mRNA.
DR PIR; F84587; F84587.
DR RefSeq; NP_179621.1; NM_127590.6.
DR AlphaFoldDB; Q9SK71; -.
DR STRING; 3702.AT2G20310.1; -.
DR PaxDb; Q9SK71; -.
DR PRIDE; Q9SK71; -.
DR ProteomicsDB; 183829; -.
DR EnsemblPlants; AT2G20310.1; AT2G20310.1; AT2G20310.
DR GeneID; 816550; -.
DR Gramene; AT2G20310.1; AT2G20310.1; AT2G20310.
DR KEGG; ath:AT2G20310; -.
DR Araport; AT2G20310; -.
DR TAIR; locus:2038977; AT2G20310.
DR eggNOG; ENOG502QRK3; Eukaryota.
DR HOGENOM; CLU_614453_0_0_1; -.
DR InParanoid; Q9SK71; -.
DR OMA; CAYWCIA; -.
DR OrthoDB; 1019358at2759; -.
DR PhylomeDB; Q9SK71; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9SK71; baseline and differential.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0008219; P:cell death; IMP:UniProtKB.
DR GO; GO:0042742; P:defense response to bacterium; IMP:TAIR.
DR GO; GO:0010150; P:leaf senescence; IMP:UniProtKB.
DR GO; GO:0034051; P:negative regulation of plant-type hypersensitive response; IMP:UniProtKB.
DR GO; GO:0009626; P:plant-type hypersensitive response; IMP:TAIR.
DR GO; GO:1900426; P:positive regulation of defense response to bacterium; IMP:UniProtKB.
PE 1: Evidence at protein level;
KW Hypersensitive response; Nucleus; Plant defense; Reference proteome.
FT CHAIN 1..430
FT /note="RPM1 interacting protein 13"
FT /id="PRO_0000454727"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 231..300
FT /note="Nuclear localization"
FT /evidence="ECO:0000303|PubMed:32446355"
SQ SEQUENCE 430 AA; 47936 MW; 9996C3C1B81DAAED CRC64;
MGSGNHVDIV DVSSGEEDVD TRGDVEYTDW LNGVMEPVDD TSDSTDIVEV LSEVRGGVNS
QYRKPNSSNQ ALEDDDDCVI LDCDPDKTRE TTSVDDDDDD DVLVVGQKGE IACRDFPHPR
HSCAKYAFNS TSHEKYCDMC HCYVCDIRAP CPYWCIAVSS IDHCHANDKE KIWKNQREYF
RTGYMPTAPS SKPTPSILRV PKNTLLRKNH VEIRPCSSST RVANPSSVKA RHRIRQPIPH
NQGLQSQPAQ SLSTVRDSVI QKDRSSYRFS LRSRVASSAG NGISIRFNNA QVSQSSHHSS
STVAPTLNPE TYTQQRNVRD HCTALPGSQS NVFTRHADQN IRGSGNRQFQ TNVDRFAPSK
APLTAEDSHT ATVQQQPGIN ENVLETKLSE FEKWLMENPN PTGPVSPLPE PGNQDYASTL
SFDFETFLND