RK10_ARATH
ID RK10_ARATH Reviewed; 220 AA.
AC Q9FY50;
DT 05-SEP-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 25-MAY-2022, entry version 111.
DE RecName: Full=50S ribosomal protein L10, chloroplastic;
DE AltName: Full=CL10;
DE Flags: Precursor;
GN Name=RPL10; OrderedLocusNames=At5g13510; ORFNames=T6I14_40;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: This protein binds directly to 23S ribosomal RNA.
CC {ECO:0000250}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL10 family.
CC {ECO:0000305}.
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DR EMBL; AL391710; CAC05428.1; -; Genomic_DNA.
DR EMBL; CP002688; AED91906.1; -; Genomic_DNA.
DR EMBL; AY086884; AAM63929.1; -; mRNA.
DR RefSeq; NP_196855.1; NM_121354.2.
DR AlphaFoldDB; Q9FY50; -.
DR SMR; Q9FY50; -.
DR BioGRID; 16473; 6.
DR STRING; 3702.AT5G13510.1; -.
DR MetOSite; Q9FY50; -.
DR PaxDb; Q9FY50; -.
DR PRIDE; Q9FY50; -.
DR ProteomicsDB; 236191; -.
DR EnsemblPlants; AT5G13510.1; AT5G13510.1; AT5G13510.
DR GeneID; 831195; -.
DR Gramene; AT5G13510.1; AT5G13510.1; AT5G13510.
DR KEGG; ath:AT5G13510; -.
DR Araport; AT5G13510; -.
DR TAIR; locus:2185051; AT5G13510.
DR eggNOG; ENOG502S56U; Eukaryota.
DR HOGENOM; CLU_092227_4_0_1; -.
DR InParanoid; Q9FY50; -.
DR OMA; PAAIKPY; -.
DR OrthoDB; 1343354at2759; -.
DR PhylomeDB; Q9FY50; -.
DR PRO; PR:Q9FY50; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FY50; baseline and differential.
DR Genevisible; Q9FY50; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0009941; C:chloroplast envelope; HDA:TAIR.
DR GO; GO:0009570; C:chloroplast stroma; HDA:TAIR.
DR GO; GO:0022626; C:cytosolic ribosome; HDA:TAIR.
DR GO; GO:0015934; C:large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR CDD; cd05797; Ribosomal_L10; 1.
DR Gene3D; 3.30.70.1730; -; 1.
DR HAMAP; MF_00362; Ribosomal_L10; 1.
DR InterPro; IPR022973; Ribosomal_L10.
DR InterPro; IPR043141; Ribosomal_L10-like_sf.
DR InterPro; IPR001790; Ribosomal_L10P.
DR PANTHER; PTHR11560; PTHR11560; 1.
DR Pfam; PF00466; Ribosomal_L10; 1.
DR SUPFAM; SSF160369; SSF160369; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Plastid; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; RNA-binding; rRNA-binding; Transit peptide.
FT TRANSIT 1..41
FT /note="Chloroplast"
FT /evidence="ECO:0000250"
FT CHAIN 42..220
FT /note="50S ribosomal protein L10, chloroplastic"
FT /id="PRO_0000249187"
SQ SEQUENCE 220 AA; 24736 MW; 4923B0694568A9DD CRC64;
MEVALLSFSS SLSPLCHQRI STLTPKTSNS PNYPRLPVIR SAVSRNKKEE TVEAVKSHLE
NCHLLAAINY KGLTVKQFQD LRRTLPDTTK LIVAKNTLVF KAIEGTKWEA LKPCMKGMNA
WLFVQTDEIP SAIKPYRSFQ KERKLENNDF AGAVFEGKFY APDNFKVLET MPTRAEVYAK
MLGALQSPAI NLVTTLQAPA REVIMVLMAY IKKLEDESNA
