RK121_ARATH
ID RK121_ARATH Reviewed; 191 AA.
AC P36210;
DT 01-JUN-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1994, sequence version 1.
DT 03-AUG-2022, entry version 147.
DE RecName: Full=50S ribosomal protein L12-1, chloroplastic;
DE AltName: Full=CL12-A;
DE Flags: Precursor;
GN Name=RPL12A; OrderedLocusNames=At3g27830; ORFNames=K16N12.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Landsberg erecta;
RX PubMed=8125949; DOI=10.1016/s0021-9258(17)37288-5;
RA Wegloehner W., Subramanian A.R.;
RT "Multicopy GTPase center protein L12 of Arabidopsis chloroplast ribosome is
RT encoded by a clustered nuclear gene family with the expressed members
RT closely linked to tRNA(Pro) genes.";
RL J. Biol. Chem. 269:7330-7336(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-163.
RC STRAIN=cv. Columbia; TISSUE=Green siliques;
RX PubMed=8281187; DOI=10.1046/j.1365-313x.1993.04061051.x;
RA Hoefte H., Desprez T., Amselem J., Chiapello H., Rouze P., Caboche M.,
RA Moisan A., Jourjon M.-F., Charpenteau J.-L., Berthomieu P., Guerrier D.,
RA Giraudat J., Quigley F., Thomas F., Yu D.-Y., Mache R., Raynal M.,
RA Cooke R., Grellet F., Delseny M., Parmentier Y., de Marcillac G., Gigot C.,
RA Fleck J., Philipps G., Axelos M., Bardet C., Tremousaygue D., Lescure B.;
RT "An inventory of 1152 expressed sequence tags obtained by partial
RT sequencing of cDNAs from Arabidopsis thaliana.";
RL Plant J. 4:1051-1061(1993).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL12 family.
CC {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; X68046; CAA48181.1; -; Genomic_DNA.
DR EMBL; AP000371; BAB02529.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE77368.1; -; Genomic_DNA.
DR EMBL; CP002686; ANM64733.1; -; Genomic_DNA.
DR EMBL; AY054567; AAK96758.1; -; mRNA.
DR EMBL; AY056124; AAL07203.1; -; mRNA.
DR EMBL; AY136308; AAM96974.1; -; mRNA.
DR EMBL; BT000419; AAN15738.1; -; mRNA.
DR EMBL; BT006058; AAP04043.1; -; mRNA.
DR EMBL; BT006568; AAP21376.1; -; mRNA.
DR EMBL; Z17719; CAA79044.1; -; mRNA.
DR PIR; A53394; A53394.
DR RefSeq; NP_001326742.1; NM_001338912.1.
DR RefSeq; NP_189421.1; NM_113699.3.
DR AlphaFoldDB; P36210; -.
DR SMR; P36210; -.
DR BioGRID; 7733; 7.
DR IntAct; P36210; 1.
DR STRING; 3702.AT3G27830.1; -.
DR iPTMnet; P36210; -.
DR PaxDb; P36210; -.
DR PRIDE; P36210; -.
DR ProteomicsDB; 226840; -.
DR EnsemblPlants; AT3G27830.1; AT3G27830.1; AT3G27830.
DR EnsemblPlants; AT3G27830.2; AT3G27830.2; AT3G27830.
DR GeneID; 822403; -.
DR Gramene; AT3G27830.1; AT3G27830.1; AT3G27830.
DR Gramene; AT3G27830.2; AT3G27830.2; AT3G27830.
DR KEGG; ath:AT3G27830; -.
DR Araport; AT3G27830; -.
DR TAIR; locus:2086435; AT3G27830.
DR eggNOG; KOG1715; Eukaryota.
DR HOGENOM; CLU_086499_1_2_1; -.
DR InParanoid; P36210; -.
DR OMA; LEDKWGV; -.
DR OrthoDB; 1626139at2759; -.
DR PhylomeDB; P36210; -.
DR PRO; PR:P36210; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; P36210; baseline and differential.
DR Genevisible; P36210; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0009941; C:chloroplast envelope; HDA:TAIR.
DR GO; GO:0042644; C:chloroplast nucleoid; HDA:TAIR.
DR GO; GO:0009570; C:chloroplast stroma; HDA:TAIR.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; HDA:TAIR.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0009506; C:plasmodesma; HDA:TAIR.
DR GO; GO:0000311; C:plastid large ribosomal subunit; ISS:TAIR.
DR GO; GO:0009579; C:thylakoid; HDA:TAIR.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR CDD; cd00387; Ribosomal_L7_L12; 1.
DR Gene3D; 1.20.5.710; -; 1.
DR Gene3D; 3.30.1390.10; -; 1.
DR HAMAP; MF_00368; Ribosomal_L7_L12; 1.
DR InterPro; IPR000206; Ribosomal_L7/12.
DR InterPro; IPR014719; Ribosomal_L7/12_C/ClpS-like.
DR InterPro; IPR013823; Ribosomal_L7/L12_C.
DR InterPro; IPR008932; Ribosomal_L7/L12_oligo.
DR InterPro; IPR036235; Ribosomal_L7/L12_oligo_N_sf.
DR PANTHER; PTHR45987; PTHR45987; 1.
DR Pfam; PF00542; Ribosomal_L12; 1.
DR Pfam; PF16320; Ribosomal_L12_N; 1.
DR SUPFAM; SSF48300; SSF48300; 1.
DR SUPFAM; SSF54736; SSF54736; 1.
DR TIGRFAMs; TIGR00855; L12; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Plastid; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; Transit peptide.
FT TRANSIT 1..58
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 59..191
FT /note="50S ribosomal protein L12-1, chloroplastic"
FT /id="PRO_0000030448"
FT CONFLICT 96
FT /note="P -> A (in Ref. 5; CAA79044)"
FT /evidence="ECO:0000305"
FT CONFLICT 137
FT /note="I -> T (in Ref. 5; CAA79044)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 191 AA; 20075 MW; CBE27E6B0DBF6455 CRC64;
MASTTLSIAT TIRSSSYPTL ASINHFPSRT TTIEFPSRFG GGSSSTLTHR ATHLRPIAAV
EAPEKIEKIG SEISSLTLEE ARILVDYLQD KFGVSPLSLA PAAAAVAAPA DGGAAAVVEE
QTEFDVVINE VPSSSRIAVI KAVRALTSLA LKEAKELIEG LPKKFKEGIT KDEAEEAKKT
LEEAGAKVSI A
