RK122_ARATH
ID RK122_ARATH Reviewed; 193 AA.
AC P36211; Q9LK93;
DT 01-JUN-1994, integrated into UniProtKB/Swiss-Prot.
DT 06-JUN-2002, sequence version 2.
DT 03-AUG-2022, entry version 148.
DE RecName: Full=50S ribosomal protein L12-2, chloroplastic;
DE AltName: Full=CL12-B;
DE Flags: Precursor;
GN Name=RPL12B; OrderedLocusNames=At3g27840; ORFNames=K16N12.20, K16N12.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Landsberg erecta;
RX PubMed=8125949; DOI=10.1016/s0021-9258(17)37288-5;
RA Wegloehner W., Subramanian A.R.;
RT "Multicopy GTPase center protein L12 of Arabidopsis chloroplast ribosome is
RT encoded by a clustered nuclear gene family with the expressed members
RT closely linked to tRNA(Pro) genes.";
RL J. Biol. Chem. 269:7330-7336(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL12 family.
CC {ECO:0000305}.
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DR EMBL; X68046; CAA48182.1; -; Genomic_DNA.
DR EMBL; AP000371; BAB02530.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE77371.1; -; Genomic_DNA.
DR PIR; B53394; B53394.
DR RefSeq; NP_189422.1; NM_113700.1.
DR AlphaFoldDB; P36211; -.
DR SMR; P36211; -.
DR STRING; 3702.AT3G27840.1; -.
DR PaxDb; P36211; -.
DR PRIDE; P36211; -.
DR EnsemblPlants; AT3G27840.1; AT3G27840.1; AT3G27840.
DR GeneID; 822404; -.
DR Gramene; AT3G27840.1; AT3G27840.1; AT3G27840.
DR KEGG; ath:AT3G27840; -.
DR Araport; AT3G27840; -.
DR TAIR; locus:2086440; AT3G27840.
DR eggNOG; KOG1715; Eukaryota.
DR HOGENOM; CLU_086499_1_2_1; -.
DR InParanoid; P36211; -.
DR OMA; GFPKKFK; -.
DR OrthoDB; 1626139at2759; -.
DR PhylomeDB; P36211; -.
DR PRO; PR:P36211; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; P36211; baseline and differential.
DR Genevisible; P36211; AT.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0000311; C:plastid large ribosomal subunit; ISS:TAIR.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR CDD; cd00387; Ribosomal_L7_L12; 1.
DR Gene3D; 1.20.5.710; -; 1.
DR Gene3D; 3.30.1390.10; -; 1.
DR HAMAP; MF_00368; Ribosomal_L7_L12; 1.
DR InterPro; IPR000206; Ribosomal_L7/12.
DR InterPro; IPR014719; Ribosomal_L7/12_C/ClpS-like.
DR InterPro; IPR013823; Ribosomal_L7/L12_C.
DR InterPro; IPR008932; Ribosomal_L7/L12_oligo.
DR InterPro; IPR036235; Ribosomal_L7/L12_oligo_N_sf.
DR PANTHER; PTHR45987; PTHR45987; 1.
DR Pfam; PF00542; Ribosomal_L12; 1.
DR Pfam; PF16320; Ribosomal_L12_N; 1.
DR SUPFAM; SSF48300; SSF48300; 1.
DR SUPFAM; SSF54736; SSF54736; 1.
DR TIGRFAMs; TIGR00855; L12; 1.
PE 3: Inferred from homology;
KW Chloroplast; Plastid; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; Transit peptide.
FT TRANSIT 1..59
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 60..193
FT /note="50S ribosomal protein L12-2, chloroplastic"
FT /id="PRO_0000030449"
FT REGION 170..193
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 170..185
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 186
FT /note="A -> P (in Ref. 1; CAA48182)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 193 AA; 20593 MW; A23321488FDCA80F CRC64;
MAATTLSIAT TIRSSSFSSG LASAHHFPSR PLSIEFPFSF GVSSSSTLSH RAIYLHPISA
VKTPKKIKKI GSEISSLTLE ESRILVDYVQ DKFGVSILFS APAAAALPPP LDNGGATASV
ERQTTFDVVI NDVPRGNRIA VITAIRAMTS LSLSESKELI EGFPKKFKEG VTKDEAEEDK
TQLEEAGAKV SIV