RK16_SOLLC
ID RK16_SOLLC Reviewed; 134 AA.
AC Q2MI63;
DT 03-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 07-FEB-2006, sequence version 1.
DT 25-MAY-2022, entry version 68.
DE RecName: Full=50S ribosomal protein L16, chloroplastic {ECO:0000255|HAMAP-Rule:MF_01342};
GN Name=rpl16 {ECO:0000255|HAMAP-Rule:MF_01342};
OS Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC Solanum subgen. Lycopersicon.
OX NCBI_TaxID=4081;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. LA3023;
RX PubMed=16575560; DOI=10.1007/s00122-006-0254-x;
RA Daniell H., Lee S.-B., Grevich J., Saski C., Quesada-Vargas T., Guda C.,
RA Tomkins J., Jansen R.K.;
RT "Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum
RT lycopersicum and comparative analyses with other Solanaceae genomes.";
RL Theor. Appl. Genet. 112:1503-1518(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. IPA-6;
RX PubMed=16830097; DOI=10.1007/s00239-005-0254-5;
RA Kahlau S., Aspinall S., Gray J.C., Bock R.;
RT "Sequence of the tomato chloroplast DNA and evolutionary comparison of
RT solanaceous plastid genomes.";
RL J. Mol. Evol. 63:194-207(2006).
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01342}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL16 family.
CC {ECO:0000255|HAMAP-Rule:MF_01342}.
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DR EMBL; DQ347959; ABC56337.1; -; Genomic_DNA.
DR EMBL; AM087200; CAJ32431.1; -; Genomic_DNA.
DR RefSeq; AP_004965.1; AC_000188.1.
DR RefSeq; YP_008563126.1; NC_007898.3.
DR AlphaFoldDB; Q2MI63; -.
DR SMR; Q2MI63; -.
DR STRING; 4081.Solyc01g007600.2.1; -.
DR PaxDb; Q2MI63; -.
DR PRIDE; Q2MI63; -.
DR GeneID; 3950427; -.
DR KEGG; sly:3950427; -.
DR eggNOG; KOG3422; Eukaryota.
DR InParanoid; Q2MI63; -.
DR OrthoDB; 1510587at2759; -.
DR Proteomes; UP000004994; Chloroplast.
DR ExpressionAtlas; Q2MI63; baseline.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0005762; C:mitochondrial large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0032543; P:mitochondrial translation; IBA:GO_Central.
DR CDD; cd01433; Ribosomal_L16_L10e; 1.
DR Gene3D; 3.90.1170.10; -; 1.
DR HAMAP; MF_01342; Ribosomal_L16; 1.
DR InterPro; IPR016180; Ribosomal_L10e/L16.
DR InterPro; IPR036920; Ribosomal_L10e/L16_sf.
DR InterPro; IPR000114; Ribosomal_L16.
DR InterPro; IPR020798; Ribosomal_L16_CS.
DR PANTHER; PTHR12220; PTHR12220; 1.
DR Pfam; PF00252; Ribosomal_L16; 1.
DR PRINTS; PR00060; RIBOSOMALL16.
DR SUPFAM; SSF54686; SSF54686; 1.
DR TIGRFAMs; TIGR01164; rplP_bact; 1.
DR PROSITE; PS00586; RIBOSOMAL_L16_1; 1.
DR PROSITE; PS00701; RIBOSOMAL_L16_2; 1.
PE 3: Inferred from homology;
KW Chloroplast; Plastid; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein.
FT CHAIN 1..134
FT /note="50S ribosomal protein L16, chloroplastic"
FT /id="PRO_0000251694"
SQ SEQUENCE 134 AA; 15259 MW; C9AD3055B5B976AC CRC64;
MLSPKRTRFR KQHRGRMKGI SYRGNRISFG KYALQALEPA WITSRQIEAG RRAMTRNARR
GGKIWVRIFP DKPVTLRPAE TRMGSGKGSP EYWVAVVKPG RILYEMGGVT ENIARRAISL
AASKMPIRTQ FIIS