RK192_ARATH
ID RK192_ARATH Reviewed; 229 AA.
AC Q8RXX5; Q8LBV7; Q9LVU0;
DT 05-SEP-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 25-MAY-2022, entry version 105.
DE RecName: Full=50S ribosomal protein L19-2, chloroplastic;
DE Flags: Precursor;
GN OrderedLocusNames=At5g47190; ORFNames=MQL5.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Located at the 30S-50S ribosomal subunit interface and binds
CC directly to 23S ribosomal RNA. {ECO:0000250}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL19 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA97152.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB018117; BAA97152.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED95482.1; -; Genomic_DNA.
DR EMBL; AY080626; AAL85972.1; -; mRNA.
DR EMBL; AY117181; AAM51256.1; -; mRNA.
DR EMBL; AY086970; AAM64533.1; -; mRNA.
DR RefSeq; NP_568677.1; NM_124090.3.
DR AlphaFoldDB; Q8RXX5; -.
DR SMR; Q8RXX5; -.
DR BioGRID; 20013; 1.
DR STRING; 3702.AT5G47190.1; -.
DR PaxDb; Q8RXX5; -.
DR PRIDE; Q8RXX5; -.
DR ProteomicsDB; 236952; -.
DR EnsemblPlants; AT5G47190.1; AT5G47190.1; AT5G47190.
DR GeneID; 834765; -.
DR Gramene; AT5G47190.1; AT5G47190.1; AT5G47190.
DR KEGG; ath:AT5G47190; -.
DR Araport; AT5G47190; -.
DR TAIR; locus:2171609; AT5G47190.
DR eggNOG; KOG1698; Eukaryota.
DR HOGENOM; CLU_076458_2_1_1; -.
DR InParanoid; Q8RXX5; -.
DR OMA; IHTIIRI; -.
DR OrthoDB; 1387536at2759; -.
DR PhylomeDB; Q8RXX5; -.
DR PRO; PR:Q8RXX5; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q8RXX5; baseline and differential.
DR Genevisible; Q8RXX5; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0009941; C:chloroplast envelope; HDA:TAIR.
DR GO; GO:0009570; C:chloroplast stroma; HDA:TAIR.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 2.30.30.790; -; 1.
DR InterPro; IPR038657; L19_sf.
DR InterPro; IPR001857; Ribosomal_L19.
DR InterPro; IPR008991; Translation_prot_SH3-like_sf.
DR PANTHER; PTHR15680; PTHR15680; 1.
DR Pfam; PF01245; Ribosomal_L19; 1.
DR PRINTS; PR00061; RIBOSOMALL19.
DR SUPFAM; SSF50104; SSF50104; 1.
DR TIGRFAMs; TIGR01024; rplS_bact; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Plastid; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; RNA-binding; rRNA-binding; Transit peptide.
FT TRANSIT 1..70
FT /note="Chloroplast"
FT /evidence="ECO:0000250"
FT CHAIN 71..229
FT /note="50S ribosomal protein L19-2, chloroplastic"
FT /id="PRO_0000249235"
FT CONFLICT 66
FT /note="K -> R (in Ref. 4; AAM64533)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 229 AA; 25469 MW; EC1CB75E8FFDC5AB CRC64;
MATSSHLLPQ ALHMIPRTPS FSSKNLGVSS ILPRASSVNS RLSVSRVFLN HSSSNFGFAI
DSKKRKEFIA KAEESTEGET EAVVENAVET EAEGEGEATV AAEEAKPPWK TRVKLGDIMG
LLNKKAIEVA ETVRPVPGLR TGDIVEIKLE VPENKRRLSI YKGIVMSRQN AGIHTTIRIR
RIIAGIGVEI VFPIYSPNIK EIKVVSHRKV RRARLYYLRD KLPRLSTFK
