RK1_PHATC
ID RK1_PHATC Reviewed; 230 AA.
AC A0T0C1;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2007, sequence version 1.
DT 25-MAY-2022, entry version 56.
DE RecName: Full=50S ribosomal protein L1, chloroplastic;
GN Name=rpl1;
OS Phaeodactylum tricornutum (strain CCAP 1055/1).
OG Plastid; Chloroplast.
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae;
OC Phaeodactylum.
OX NCBI_TaxID=556484;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCAP 1055/1;
RX PubMed=17252281; DOI=10.1007/s00438-006-0199-4;
RA Oudot-Le Secq M.-P., Grimwood J., Shapiro H., Armbrust E.V., Bowler C.,
RA Green B.R.;
RT "Chloroplast genomes of the diatoms Phaeodactylum tricornutum and
RT Thalassiosira pseudonana: comparison with other plastid genomes of the red
RT lineage.";
RL Mol. Genet. Genomics 277:427-439(2007).
CC -!- FUNCTION: Binds directly to 23S rRNA. Might be involved in E site tRNA
CC release (Potential). {ECO:0000305}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL1 family.
CC {ECO:0000305}.
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DR EMBL; EF067920; ABK20619.1; -; Genomic_DNA.
DR RefSeq; YP_874396.1; NC_008588.1.
DR AlphaFoldDB; A0T0C1; -.
DR SMR; A0T0C1; -.
DR STRING; 556484.A0T0C1; -.
DR PRIDE; A0T0C1; -.
DR GeneID; 4524711; -.
DR InParanoid; A0T0C1; -.
DR Proteomes; UP000000759; Chloroplast.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00403; Ribosomal_L1; 1.
DR Gene3D; 3.40.50.790; -; 1.
DR HAMAP; MF_01318_B; Ribosomal_L1_B; 1.
DR InterPro; IPR005878; Ribosom_L1_bac-type.
DR InterPro; IPR002143; Ribosomal_L1.
DR InterPro; IPR023674; Ribosomal_L1-like.
DR InterPro; IPR028364; Ribosomal_L1/biogenesis.
DR InterPro; IPR016095; Ribosomal_L1_3-a/b-sand.
DR InterPro; IPR023673; Ribosomal_L1_CS.
DR Pfam; PF00687; Ribosomal_L1; 1.
DR PIRSF; PIRSF002155; Ribosomal_L1; 1.
DR SUPFAM; SSF56808; SSF56808; 1.
DR TIGRFAMs; TIGR01169; rplA_bact; 1.
DR PROSITE; PS01199; RIBOSOMAL_L1; 1.
PE 3: Inferred from homology;
KW Chloroplast; Plastid; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; RNA-binding; rRNA-binding.
FT CHAIN 1..230
FT /note="50S ribosomal protein L1, chloroplastic"
FT /id="PRO_0000276399"
SQ SEQUENCE 230 AA; 25427 MW; 460D60864046D85B CRC64;
MQKVSRRHKE NFERTKNIVY SNIDEAIAVL KETATTKFVE SVELHANLNI DPKYADQQLR
TTVTLPNGIG KQVVIAVLTN EENFEEAKSS GGDIVGNDEL IAQITQGQIN FDLLIATPNM
MPKLAKLGRM LGPKGLMPSP KSGTVTSTLQ STLTEFKKGK FEYKADKTGI VHVNFGKSNF
TNEQLVENLK ALYQSIEQNR PSGVKGKYFK SVSICTTMGP SVKLDLEIFA