RK22_ORYSJ
ID RK22_ORYSJ Reviewed; 149 AA.
AC P0C446; P12140; Q6QY46; Q7F1T7;
DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 12-JUN-2007, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=50S ribosomal protein L22, chloroplastic;
GN Name=rpl22; ORFNames=Nip117;
OS Oryza sativa subsp. japonica (Rice).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=2770692; DOI=10.1007/bf02464880;
RA Hiratsuka J., Shimada H., Whittier R., Ishibashi T., Sakamoto M., Mori M.,
RA Kondo C., Honji Y., Sun C.-R., Meng B.-Y., Li Y.-Q., Kanno A.,
RA Nishizawa Y., Hirai A., Shinozaki K., Sugiura M.;
RT "The complete sequence of the rice (Oryza sativa) chloroplast genome:
RT intermolecular recombination between distinct tRNA genes accounts for a
RT major plastid DNA inversion during the evolution of the cereals.";
RL Mol. Gen. Genet. 217:185-194(1989).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15122023; DOI=10.1104/pp.103.031245;
RA Tang J., Xia H., Cao M., Zhang X., Zeng W., Hu S., Tong W., Wang J.,
RA Wang J., Yu J., Yang H., Zhu L.;
RT "A comparison of rice chloroplast genomes.";
RL Plant Physiol. 135:412-420(2004).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-12.
RC STRAIN=cv. Labelle; TISSUE=Seedling;
RX PubMed=3240862; DOI=10.1016/0378-1119(88)90099-6;
RA Moon E., Wu R.;
RT "Organization and nucleotide sequence of genes at both junctions between
RT the two inverted repeats and the large single-copy region in the rice
RT chloroplast genome.";
RL Gene 70:1-12(1988).
CC -!- FUNCTION: This protein binds specifically to 23S rRNA. {ECO:0000250}.
CC -!- FUNCTION: The globular domain of the protein is located near the
CC polypeptide exit tunnel on the outside of the subunit, while an
CC extended beta-hairpin is found that lines the wall of the exit tunnel
CC in the center of the 70S ribosome. {ECO:0000250}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL22 family.
CC {ECO:0000305}.
CC -!- CAUTION: A stretch of the chloroplast genome is duplicated within
CC chromosomes 7, 8 and 9 resulting in the duplication of the gene. The
CC expression of these duplicated genes have not been demonstrated.
CC {ECO:0000305}.
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DR EMBL; X15901; CAA33935.1; -; Genomic_DNA.
DR EMBL; AY522330; AAS46148.1; -; Genomic_DNA.
DR EMBL; AP005161; BAD05515.1; -; Genomic_DNA.
DR EMBL; AP003825; BAC10088.1; -; Genomic_DNA.
DR EMBL; AP005452; BAD31430.1; -; Genomic_DNA.
DR EMBL; AP005683; BAD33781.1; -; Genomic_DNA.
DR EMBL; AP005707; BAD36258.1; -; Genomic_DNA.
DR EMBL; M22826; AAA84594.1; -; Genomic_DNA.
DR PIR; JQ0266; R5RZ22.
DR RefSeq; NP_039425.1; NC_001320.1.
DR AlphaFoldDB; P0C446; -.
DR SMR; P0C446; -.
DR STRING; 39947.P0C446; -.
DR PaxDb; P0C446; -.
DR PRIDE; P0C446; -.
DR GeneID; 3131426; -.
DR KEGG; osa:3131426; -.
DR InParanoid; P0C446; -.
DR OrthoDB; 1389236at2759; -.
DR Proteomes; UP000000763; Chromosome 7.
DR Proteomes; UP000000763; Chromosome 8.
DR Proteomes; UP000000763; Chromosome 9.
DR Proteomes; UP000059680; Chloroplast.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0015934; C:large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0009536; C:plastid; IC:Gramene.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0042255; P:ribosome assembly; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00336; Ribosomal_L22; 1.
DR Gene3D; 3.90.470.10; -; 1.
DR HAMAP; MF_01331_B; Ribosomal_L22_B; 1.
DR InterPro; IPR001063; Ribosomal_L22.
DR InterPro; IPR018260; Ribosomal_L22/L17_CS.
DR InterPro; IPR036394; Ribosomal_L22/L17_sf.
DR InterPro; IPR005727; Ribosomal_L22_bac/chlpt-type.
DR PANTHER; PTHR13501; PTHR13501; 1.
DR Pfam; PF00237; Ribosomal_L22; 1.
DR SUPFAM; SSF54843; SSF54843; 1.
DR TIGRFAMs; TIGR01044; rplV_bact; 1.
DR PROSITE; PS00464; RIBOSOMAL_L22; 1.
PE 3: Inferred from homology;
KW Chloroplast; Plastid; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; RNA-binding; rRNA-binding.
FT CHAIN 1..149
FT /note="50S ribosomal protein L22, chloroplastic"
FT /id="PRO_0000290048"
SQ SEQUENCE 149 AA; 17683 MW; 25E0938943E209F2 CRC64;
MTSFKLVKYT PRIKKKKSGL RKLARKVPTD RLLKFERVFK AQKRIHMSVF KVQRVLDEIR
WRYYEETVMI LNLMPYRASY PILKLVYSAA ANATHYRDFD KANLFITKAE VSRSTIMNKF
RPRARGRSSP IKKTMCHITI VLNIVKKSK