RK27_ARATH
ID RK27_ARATH Reviewed; 198 AA.
AC Q9FLN4;
DT 05-MAR-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 25-MAY-2022, entry version 119.
DE RecName: Full=50S ribosomal protein L27, chloroplastic;
DE AltName: Full=CL27;
DE Flags: Precursor;
GN Name=RPL27; OrderedLocusNames=At5g40950; ORFNames=MEE6.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9628582; DOI=10.1093/dnares/5.1.41;
RA Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence
RT features of the regions of 1,456,315 bp covered by nineteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:41-54(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP DISRUPTION PHENOTYPE.
RX PubMed=22900828; DOI=10.1111/tpj.12000;
RA Romani I., Tadini L., Rossi F., Masiero S., Pribil M., Jahns P., Kater M.,
RA Leister D., Pesaresi P.;
RT "Versatile roles of Arabidopsis plastid ribosomal proteins in plant growth
RT and development.";
RL Plant J. 72:922-934(2012).
CC -!- SUBUNIT: Part of the 50S ribosomal subunit.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- DISRUPTION PHENOTYPE: Embryonic lethality. Embryo development arrested
CC at the globular stage. {ECO:0000269|PubMed:22900828}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL27 family.
CC {ECO:0000305}.
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DR EMBL; AB010072; BAB09697.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94618.1; -; Genomic_DNA.
DR EMBL; AY046039; AAK76713.1; -; mRNA.
DR EMBL; AY117267; AAM51342.1; -; mRNA.
DR RefSeq; NP_198911.1; NM_123460.5.
DR AlphaFoldDB; Q9FLN4; -.
DR SMR; Q9FLN4; -.
DR BioGRID; 19348; 14.
DR STRING; 3702.AT5G40950.1; -.
DR PaxDb; Q9FLN4; -.
DR PRIDE; Q9FLN4; -.
DR ProteomicsDB; 234852; -.
DR EnsemblPlants; AT5G40950.1; AT5G40950.1; AT5G40950.
DR GeneID; 834097; -.
DR Gramene; AT5G40950.1; AT5G40950.1; AT5G40950.
DR KEGG; ath:AT5G40950; -.
DR Araport; AT5G40950; -.
DR TAIR; locus:2162971; AT5G40950.
DR eggNOG; KOG4600; Eukaryota.
DR HOGENOM; CLU_095424_0_0_1; -.
DR InParanoid; Q9FLN4; -.
DR OMA; YRVRKRE; -.
DR OrthoDB; 1177118at2759; -.
DR PhylomeDB; Q9FLN4; -.
DR EvolutionaryTrace; Q9FLN4; -.
DR PRO; PR:Q9FLN4; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FLN4; baseline and differential.
DR Genevisible; Q9FLN4; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0009941; C:chloroplast envelope; HDA:TAIR.
DR GO; GO:0009570; C:chloroplast stroma; HDA:TAIR.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0009579; C:thylakoid; HDA:TAIR.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR HAMAP; MF_00539; Ribosomal_L27; 1.
DR InterPro; IPR001684; Ribosomal_L27.
DR InterPro; IPR018261; Ribosomal_L27_CS.
DR PANTHER; PTHR15893; PTHR15893; 1.
DR Pfam; PF01016; Ribosomal_L27; 1.
DR PRINTS; PR00063; RIBOSOMALL27.
DR TIGRFAMs; TIGR00062; L27; 1.
DR PROSITE; PS00831; RIBOSOMAL_L27; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Plastid; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; Transit peptide.
FT TRANSIT 1..58
FT /note="Chloroplast"
FT /evidence="ECO:0000305"
FT CHAIN 59..198
FT /note="50S ribosomal protein L27, chloroplastic"
FT /id="PRO_0000030493"
SQ SEQUENCE 198 AA; 21737 MW; 2B9C46674A24D6EE CRC64;
MAMATSMSLN LIGAFKGLSL SSTSSFLRGD LSFSPKTSFT VTLPLENLQA PIPLTIESAH
KKGAGSTKNG RDSPGQRLGV KIYGDQVAKP GAIIVRQRGT KFHAGKNVGI GKDHTIFSLI
DGLVKFEKFG PDRKKISVYP REIVPENPNS YRARKRENFR LQREKKKARR ENYSYTLPTP
ELVLASASVD DAEANPEC