RK2_ORYNI
ID RK2_ORYNI Reviewed; 273 AA.
AC Q6EN83;
DT 21-JUN-2005, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 25-MAY-2022, entry version 78.
DE RecName: Full=50S ribosomal protein L2, chloroplastic;
GN Name=rpl2-A;
GN and
GN Name=rpl2-B;
OS Oryza nivara (Indian wild rice) (Oryza sativa f. spontanea).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4536;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. SL10 {ECO:0000312|Proteomes:UP000006591};
RX PubMed=15556301; DOI=10.1016/j.gene.2004.06.008;
RA Masood M.S., Nishikawa T., Fukuoka S., Njenga P.K., Tsudzuki T.,
RA Kadowaki K.;
RT "The complete nucleotide sequence of wild rice (Oryza nivara) chloroplast
RT genome: first genome wide comparative sequence analysis of wild and
RT cultivated rice.";
RL Gene 340:133-139(2004).
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL2 family.
CC {ECO:0000305}.
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DR EMBL; AP006728; BAD26869.1; -; Genomic_DNA.
DR EMBL; AP006728; BAD26822.1; -; Genomic_DNA.
DR RefSeq; YP_052793.1; NC_005973.1.
DR RefSeq; YP_052839.1; NC_005973.1.
DR AlphaFoldDB; Q6EN83; -.
DR SMR; Q6EN83; -.
DR STRING; 4536.ONIVA10G19820.1; -.
DR GeneID; 2885923; -.
DR GeneID; 2885924; -.
DR eggNOG; KOG0438; Eukaryota.
DR eggNOG; KOG0899; Eukaryota.
DR Proteomes; UP000006591; Chloroplast.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR GO; GO:0009536; C:plastid; IC:Gramene.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0016740; F:transferase activity; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 2.30.30.30; -; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR Gene3D; 4.10.950.10; -; 1.
DR HAMAP; MF_01320_B; Ribosomal_L2_B; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR022666; Rbsml_prot_L2_RNA-bd_dom.
DR InterPro; IPR014722; Rib_L2_dom2.
DR InterPro; IPR002171; Ribosomal_L2.
DR InterPro; IPR005880; Ribosomal_L2_bac/org-type.
DR InterPro; IPR022669; Ribosomal_L2_C.
DR InterPro; IPR022671; Ribosomal_L2_CS.
DR InterPro; IPR014726; Ribosomal_L2_dom3.
DR InterPro; IPR008991; Translation_prot_SH3-like_sf.
DR PANTHER; PTHR13691; PTHR13691; 1.
DR Pfam; PF00181; Ribosomal_L2; 1.
DR Pfam; PF03947; Ribosomal_L2_C; 1.
DR PIRSF; PIRSF002158; Ribosomal_L2; 1.
DR SMART; SM01383; Ribosomal_L2; 1.
DR SMART; SM01382; Ribosomal_L2_C; 1.
DR SUPFAM; SSF50104; SSF50104; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR TIGRFAMs; TIGR01171; rplB_bact; 1.
DR PROSITE; PS00467; RIBOSOMAL_L2; 1.
PE 3: Inferred from homology;
KW Chloroplast; Plastid; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein.
FT CHAIN 1..273
FT /note="50S ribosomal protein L2, chloroplastic"
FT /id="PRO_0000129689"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 225..273
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 254..273
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 273 AA; 29942 MW; AA4153C62AA8729B CRC64;
MAKHLYKTPI PSTRKGTIDR QVKSNPRNNL IHGRHRCGKG RNSRGIITAR HRGGGHKRLY
RKIDFRRNQK DISGRIVTIE YDPNRNAYIC LIHYGDGEKG YILHPRGAII GDTIVSGTKV
PISMGNALPL TDMPLGTAIH NIEITRGRGG QLARAAGAVA KLIAKEGKSA TLRLPSGEVR
LVSQNCLATV GQVGNVGVNQ KSLGRAGSKC WLGKRPVVRG VVMNPVDHPH GGGEGKAPIG
RKKPTTPWGY PALGRRTRKR KKYSDSFILR RRK