RK34_ARATH
ID RK34_ARATH Reviewed; 157 AA.
AC Q9LP37;
DT 19-SEP-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=50S ribosomal protein L34, chloroplastic;
DE AltName: Full=CL34;
DE Flags: Precursor;
GN Name=RPL34; OrderedLocusNames=At1g29070; ORFNames=F28N24.22;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: This protein binds directly to 23S ribosomal RNA.
CC {ECO:0000250}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL34 family.
CC {ECO:0000305}.
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DR EMBL; AC021043; AAF88127.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE31039.1; -; Genomic_DNA.
DR EMBL; AY091237; AAM14176.1; -; mRNA.
DR EMBL; AY063876; AAL36232.1; -; mRNA.
DR EMBL; AY084670; AAM61232.1; -; mRNA.
DR PIR; A86413; A86413.
DR RefSeq; NP_174202.1; NM_102648.4.
DR AlphaFoldDB; Q9LP37; -.
DR SMR; Q9LP37; -.
DR STRING; 3702.AT1G29070.1; -.
DR PaxDb; Q9LP37; -.
DR PRIDE; Q9LP37; -.
DR ProteomicsDB; 236196; -.
DR EnsemblPlants; AT1G29070.1; AT1G29070.1; AT1G29070.
DR GeneID; 839781; -.
DR Gramene; AT1G29070.1; AT1G29070.1; AT1G29070.
DR KEGG; ath:AT1G29070; -.
DR Araport; AT1G29070; -.
DR TAIR; locus:2029944; AT1G29070.
DR eggNOG; KOG1267; Eukaryota.
DR HOGENOM; CLU_114311_0_0_1; -.
DR InParanoid; Q9LP37; -.
DR OMA; HWMVVER; -.
DR OrthoDB; 1604181at2759; -.
DR PhylomeDB; Q9LP37; -.
DR PRO; PR:Q9LP37; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LP37; baseline and differential.
DR Genevisible; Q9LP37; AT.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0005762; C:mitochondrial large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR HAMAP; MF_00391; Ribosomal_L34; 1.
DR InterPro; IPR000271; Ribosomal_L34.
DR PANTHER; PTHR14503; PTHR14503; 1.
DR Pfam; PF00468; Ribosomal_L34; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Plastid; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; RNA-binding; rRNA-binding; Transit peptide.
FT TRANSIT 1..97
FT /note="Chloroplast"
FT /evidence="ECO:0000250"
FT CHAIN 98..157
FT /note="50S ribosomal protein L34, chloroplastic"
FT /id="PRO_0000249882"
SQ SEQUENCE 157 AA; 16741 MW; 45B495924E246AA1 CRC64;
MASLSTSVVA SASSRLWNPA ASNGKICVPS ASLSLRTGCR RSSSSLTSSA SSQLLHCSFL
SSPVSLASPF SGLSIAFDLS SQTSGLNGQR RRGLVVRAGK AALCQTKRSR SRKSLARTHG
FRRRMRTTSG RATIKRRRAK GRWNLCPKSN PSSGKRA
