RK35_ARATH
ID RK35_ARATH Reviewed; 145 AA.
AC Q8VZ55; O82237; Q9LWB6;
DT 20-JAN-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2002, sequence version 1.
DT 25-MAY-2022, entry version 124.
DE RecName: Full=50S ribosomal protein L35, chloroplastic {ECO:0000305};
DE Flags: Precursor;
GN Name=RPL35 {ECO:0000305};
GN OrderedLocusNames=At2g24090 {ECO:0000312|Araport:AT2G24090};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Kavousi M., Subramanian A.R.;
RL Submitted (MAY-1995) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP DISRUPTION PHENOTYPE.
RX PubMed=22900828; DOI=10.1111/tpj.12000;
RA Romani I., Tadini L., Rossi F., Masiero S., Pribil M., Jahns P., Kater M.,
RA Leister D., Pesaresi P.;
RT "Versatile roles of Arabidopsis plastid ribosomal proteins in plant growth
RT and development.";
RL Plant J. 72:922-934(2012).
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000305}.
CC -!- INTERACTION:
CC Q8VZ55; Q9SZI2: NAP1;1; NbExp=4; IntAct=EBI-4470631, EBI-4424361;
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000255}.
CC -!- DISRUPTION PHENOTYPE: Embryonic lethality. Embryo development arrested
CC at the globular stage. {ECO:0000269|PubMed:22900828}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL35 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC63677.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAM15097.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAA60774.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; X87332; CAA60774.1; ALT_INIT; Genomic_DNA.
DR EMBL; AC005170; AAC63677.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC005967; AAM15097.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC07528.1; -; Genomic_DNA.
DR EMBL; AY065235; AAL38711.1; -; mRNA.
DR EMBL; AY096532; AAM20182.1; -; mRNA.
DR PIR; E84632; E84632.
DR RefSeq; NP_850047.1; NM_179716.3.
DR AlphaFoldDB; Q8VZ55; -.
DR SMR; Q8VZ55; -.
DR IntAct; Q8VZ55; 1.
DR STRING; 3702.AT2G24090.1; -.
DR PaxDb; Q8VZ55; -.
DR PRIDE; Q8VZ55; -.
DR ProteomicsDB; 236933; -.
DR EnsemblPlants; AT2G24090.1; AT2G24090.1; AT2G24090.
DR GeneID; 816943; -.
DR Gramene; AT2G24090.1; AT2G24090.1; AT2G24090.
DR KEGG; ath:AT2G24090; -.
DR Araport; AT2G24090; -.
DR TAIR; locus:2061441; AT2G24090.
DR eggNOG; ENOG502S11I; Eukaryota.
DR HOGENOM; CLU_130670_0_0_1; -.
DR InParanoid; Q8VZ55; -.
DR OMA; VECHKGY; -.
DR OrthoDB; 1585589at2759; -.
DR PhylomeDB; Q8VZ55; -.
DR PRO; PR:Q8VZ55; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q8VZ55; baseline and differential.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0015934; C:large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 4.10.410.60; -; 1.
DR HAMAP; MF_00514; Ribosomal_L35; 1.
DR InterPro; IPR021137; Ribosomal_L35.
DR InterPro; IPR018265; Ribosomal_L35_CS.
DR InterPro; IPR001706; Ribosomal_L35_non-mt.
DR InterPro; IPR037229; Ribosomal_L35_sf.
DR PANTHER; PTHR33343; PTHR33343; 1.
DR Pfam; PF01632; Ribosomal_L35p; 1.
DR PRINTS; PR00064; RIBOSOMALL35.
DR SUPFAM; SSF143034; SSF143034; 1.
DR TIGRFAMs; TIGR00001; rpmI_bact; 1.
DR PROSITE; PS00936; RIBOSOMAL_L35; 1.
PE 1: Evidence at protein level;
KW Chloroplast; Plastid; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; Transit peptide.
FT TRANSIT 1..56
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 57..145
FT /note="50S ribosomal protein L35, chloroplastic"
FT /evidence="ECO:0000255"
FT /id="PRO_0000435324"
SQ SEQUENCE 145 AA; 16089 MW; B6389C87A3C72E4E CRC64;
MASLSMASVN VSFCHPLRSS SPKVSLRSSV HFATSLSSSH SISGLRAVLP LKISTVASPN
SQKLHSFTVF AHKGYKMKTH KASAKRFRVT GRGKIVRRRS GKQHLLAKKN NKRKLRLSKM
TEVNRSDYDN VIGALPYLKV NRKAT
