RK5_THAPS
ID RK5_THAPS Reviewed; 238 AA.
AC A0T0Y5;
DT 03-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2007, sequence version 1.
DT 03-AUG-2022, entry version 57.
DE RecName: Full=50S ribosomal protein L5, chloroplastic;
GN Name=rpl5;
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OG Plastid; Chloroplast.
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=35128;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 / NEPCC58 / CCAP 1085/12;
RX PubMed=17252281; DOI=10.1007/s00438-006-0199-4;
RA Oudot-Le Secq M.-P., Grimwood J., Shapiro H., Armbrust E.V., Bowler C.,
RA Green B.R.;
RT "Chloroplast genomes of the diatoms Phaeodactylum tricornutum and
RT Thalassiosira pseudonana: comparison with other plastid genomes of the red
RT lineage.";
RL Mol. Genet. Genomics 277:427-439(2007).
CC -!- FUNCTION: Binds 5S rRNA, forms part of the central protuberance of the
CC 50S subunit. {ECO:0000250}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit; contacts the 5S rRNA.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL5 family.
CC {ECO:0000305}.
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DR EMBL; EF067921; ABK20820.1; -; Genomic_DNA.
DR RefSeq; YP_874597.1; NC_008589.1.
DR AlphaFoldDB; A0T0Y5; -.
DR SMR; A0T0Y5; -.
DR PRIDE; A0T0Y5; -.
DR GeneID; 4524760; -.
DR InParanoid; A0T0Y5; -.
DR Proteomes; UP000001449; Chloroplast.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1440.10; -; 1.
DR HAMAP; MF_01333_B; Ribosomal_L5_B; 1.
DR InterPro; IPR002132; Ribosomal_L5.
DR InterPro; IPR020930; Ribosomal_L5_bac-type.
DR InterPro; IPR031309; Ribosomal_L5_C.
DR InterPro; IPR022803; Ribosomal_L5_dom_sf.
DR InterPro; IPR031310; Ribosomal_L5_N.
DR PANTHER; PTHR11994; PTHR11994; 1.
DR Pfam; PF00281; Ribosomal_L5; 1.
DR Pfam; PF00673; Ribosomal_L5_C; 1.
DR SUPFAM; SSF55282; SSF55282; 1.
PE 3: Inferred from homology;
KW Chloroplast; Plastid; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; RNA-binding; rRNA-binding.
FT CHAIN 1..238
FT /note="50S ribosomal protein L5, chloroplastic"
FT /id="PRO_0000365655"
SQ SEQUENCE 238 AA; 27571 MW; 11058AB8A8840F6D CRC64;
MRSQQSLEEI AELYGLLENI KKEYEDGIHS VLRKSNPELF SNPHTIPKLK KISINRGLGL
AAQNTNILKK SITEFTRITG QKPLITRAKK AVAGFKIREE MELGLSSTLR GEKMYSFLTK
LIFFTFAQIR DFRGLSVRSF DKAGNYTFSL KEQLIFPEIE YDDVDQVQGL SITLVLDSST
PKSRSKTVDR VLNGMILLKF LRFPLNDCGY YDKYESFGEI TQVWDKKKHL RRKRWSQE