RL101_ORYSI
ID RL101_ORYSI Reviewed; 224 AA.
AC A2ZCQ7; P45635; Q2R8Q3; Q40650;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 11-SEP-2007, sequence version 2.
DT 25-MAY-2022, entry version 73.
DE RecName: Full=60S ribosomal protein L10-1;
DE AltName: Full=Protein QM;
DE AltName: Full=Putative tumor suppressor SC34;
GN Name=SC34; ORFNames=OsI_034350;
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. IR36;
RA Kim J.K.;
RT "Isolation and characterization of two rice genes encoding a putative tumor
RT suppressor.";
RL Submitted (SEP-1994) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 52-224.
RC STRAIN=cv. Guang-Lu-Ai No.4; TISSUE=Seedling;
RA Zong H., Jiang Y., Cao K.;
RT "Isolation and Characterization of a rice QM gene, tumor suppressor or
RT development regulator.";
RL Thesis (1996), Fudan University, China.
CC -!- SUBUNIT: Component of the small ribosomal subunit. Mature ribosomes
CC consist of a small (40S) and a large (60S) subunit. The 40S subunit
CC contains about 33 different proteins and 1 molecule of RNA (18S). The
CC 60S subunit contains about 49 different proteins and 3 molecules of RNA
CC (25S, 5.8S and 5S) (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL16 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA57339.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; X81691; CAA57339.1; ALT_FRAME; mRNA.
DR EMBL; CM000136; EAY80391.1; -; Genomic_DNA.
DR EMBL; U55212; AAA99158.1; -; mRNA.
DR PIR; S49575; S49575.
DR AlphaFoldDB; A2ZCQ7; -.
DR SMR; A2ZCQ7; -.
DR STRING; 39946.A2ZCQ7; -.
DR iPTMnet; A2ZCQ7; -.
DR HOGENOM; CLU_084051_0_0_1; -.
DR Proteomes; UP000007015; Chromosome 11.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd01433; Ribosomal_L16_L10e; 1.
DR Gene3D; 3.90.1170.10; -; 1.
DR InterPro; IPR001197; Ribosomal_L10e.
DR InterPro; IPR016180; Ribosomal_L10e/L16.
DR InterPro; IPR036920; Ribosomal_L10e/L16_sf.
DR InterPro; IPR018255; Ribosomal_L10e_CS.
DR PANTHER; PTHR11726; PTHR11726; 1.
DR Pfam; PF00252; Ribosomal_L16; 1.
DR PIRSF; PIRSF005590; Ribosomal_L10; 1.
DR SUPFAM; SSF54686; SSF54686; 1.
DR TIGRFAMs; TIGR00279; uL16_euk_arch; 1.
DR PROSITE; PS01257; RIBOSOMAL_L10E; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..224
FT /note="60S ribosomal protein L10-1"
FT /id="PRO_0000302053"
FT CONFLICT 94
FT /note="F -> V (in Ref. 1; CAA57339)"
FT /evidence="ECO:0000305"
FT CONFLICT 198
FT /note="Q -> K (in Ref. 1; CAA57339)"
FT /evidence="ECO:0000305"
FT CONFLICT 205
FT /note="R -> L (in Ref. 2; EAY80391)"
FT /evidence="ECO:0000305"
FT CONFLICT 222
FT /note="A -> R (in Ref. 1; CAA57339)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 224 AA; 25347 MW; A87D6163592B7E8A CRC64;
MGRRPARCYR QIKNKPYPKS RYCRGVPDPK IRIYDVGMKK KGVDEFPYCV HLVSWEKENV
SSEALEAARI ACNKYMTKNA GKDAFHLRVR VHPFHVLRIN KMLSCAGADR LQTGMRGAFG
KPQGTCARVD IGQVLLSVRC KESNAKHAEE ALRRAKFKFP GRQKIIHSRK WGFTKFTREE
YVKLKAEGRI MSDGVNAQLL GSHGRLAKRA PGKAFLAETI QASA
