RL102_ORYSI
ID RL102_ORYSI Reviewed; 219 AA.
AC A2Y0T4; P45636; Q40649; Q40717;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 11-SEP-2007, sequence version 2.
DT 25-MAY-2022, entry version 72.
DE RecName: Full=60S ribosomal protein L10-2;
DE AltName: Full=Protein QM1;
DE AltName: Full=Putative tumor suppressor SG12;
GN Name=SG12; Synonyms=QM1; ORFNames=OsI_017927;
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Guang-Lu-Ai No.4; TISSUE=Seedling;
RA Zong H., Jiang Y., Cao K.;
RT "Isolation and Characterization of a rice QM gene, tumor suppressor or
RT development regulator.";
RL Thesis (1996), Fudan University, China.
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. IR36;
RA Kim J.K.;
RT "Isolation and characterization of two rice genes encoding a putative tumor
RT suppressor.";
RL Submitted (SEP-1994) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 77-219.
RC STRAIN=cv. IR36; TISSUE=Seed;
RA Kim J.K.;
RT "A rice novel gene.";
RL Submitted (FEB-1992) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Component of the small ribosomal subunit. Mature ribosomes
CC consist of a small (40S) and a large (60S) subunit. The 40S subunit
CC contains about 33 different proteins and 1 molecule of RNA (18S). The
CC 60S subunit contains about 49 different proteins and 3 molecules of RNA
CC (25S, 5.8S and 5S) (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL16 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CM000130; Type=Frameshift; Evidence={ECO:0000305};
CC Sequence=CM000130; Type=Miscellaneous discrepancy; Note=Sequencing errors.; Evidence={ECO:0000305};
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DR EMBL; U55048; AAA98698.1; -; Genomic_DNA.
DR EMBL; X81692; CAA57340.1; -; Genomic_DNA.
DR EMBL; CM000130; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; X64621; CAA45905.1; -; mRNA.
DR PIR; S19224; S19224.
DR PIR; S49596; S49596.
DR AlphaFoldDB; A2Y0T4; -.
DR SMR; A2Y0T4; -.
DR STRING; 39946.A2Y0T4; -.
DR iPTMnet; A2Y0T4; -.
DR Proteomes; UP000007015; Chromosome 5.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd01433; Ribosomal_L16_L10e; 1.
DR Gene3D; 3.90.1170.10; -; 1.
DR InterPro; IPR001197; Ribosomal_L10e.
DR InterPro; IPR016180; Ribosomal_L10e/L16.
DR InterPro; IPR036920; Ribosomal_L10e/L16_sf.
DR InterPro; IPR018255; Ribosomal_L10e_CS.
DR PANTHER; PTHR11726; PTHR11726; 1.
DR Pfam; PF00252; Ribosomal_L16; 1.
DR PIRSF; PIRSF005590; Ribosomal_L10; 1.
DR SUPFAM; SSF54686; SSF54686; 1.
DR TIGRFAMs; TIGR00279; uL16_euk_arch; 1.
DR PROSITE; PS01257; RIBOSOMAL_L10E; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..219
FT /note="60S ribosomal protein L10-2"
FT /id="PRO_0000302054"
FT CONFLICT 9
FT /note="Y -> N (in Ref. 2; CAA57340)"
FT /evidence="ECO:0000305"
FT CONFLICT 68..69
FT /note="AR -> G (in Ref. 2; CAA57340)"
FT /evidence="ECO:0000305"
FT CONFLICT 77..79
FT /note="TKS -> EFP (in Ref. 4; CAA45905)"
FT /evidence="ECO:0000305"
FT CONFLICT 216
FT /note="L -> F (in Ref. 2; CAA57340)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 219 AA; 24672 MW; CE57477068725DBF CRC64;
MGRRPARCYR QIKNKPYPKS RYCRGVPDPK IRIYDVGMKK KGVDEFSHCV HLVSWEKENV
TSEALEAARI ACNKYMTKSA GKDAFHLRVR VHPFHVLRIN KMLSCAGADR LQTGMRGAFG
KPQGTCARVD IGQVLLSVRC KPNNAVHASE ALRRAKFKFP GRQKIIESRK WGFTKFSRDE
YVRLKSEGRI MPDGVNAKLL GCHGRLSARA PGKAFLSAA
