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RL102_ORYSJ
ID   RL102_ORYSJ             Reviewed;         219 AA.
AC   Q0DKF0; P45636; Q40649; Q40717;
DT   11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT   17-OCT-2006, sequence version 1.
DT   25-MAY-2022, entry version 92.
DE   RecName: Full=60S ribosomal protein L10-2;
DE   AltName: Full=Protein QM1;
DE   AltName: Full=Putative tumor suppressor SG12;
GN   Name=SG12; Synonyms=QM1; OrderedLocusNames=Os05g0169100, LOC_Os05g07700;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- SUBUNIT: Component of the small ribosomal subunit. Mature ribosomes
CC       consist of a small (40S) and a large (60S) subunit. The 40S subunit
CC       contains about 33 different proteins and 1 molecule of RNA (18S). The
CC       60S subunit contains about 49 different proteins and 3 molecules of RNA
CC       (25S, 5.8S and 5S) (By similarity). {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL16 family.
CC       {ECO:0000305}.
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DR   EMBL; AP008211; BAF16673.1; -; Genomic_DNA.
DR   EMBL; AP014961; BAS92463.1; -; Genomic_DNA.
DR   EMBL; AK066128; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; XP_015639565.1; XM_015784079.1.
DR   AlphaFoldDB; Q0DKF0; -.
DR   SMR; Q0DKF0; -.
DR   STRING; 4530.OS05T0169100-01; -.
DR   PaxDb; Q0DKF0; -.
DR   PRIDE; Q0DKF0; -.
DR   EnsemblPlants; Os05t0169100-01; Os05t0169100-01; Os05g0169100.
DR   GeneID; 4337928; -.
DR   Gramene; Os05t0169100-01; Os05t0169100-01; Os05g0169100.
DR   KEGG; osa:4337928; -.
DR   eggNOG; KOG0857; Eukaryota.
DR   HOGENOM; CLU_084051_0_0_1; -.
DR   InParanoid; Q0DKF0; -.
DR   OMA; MSVRAKE; -.
DR   OrthoDB; 1215841at2759; -.
DR   Proteomes; UP000000763; Chromosome 5.
DR   Proteomes; UP000059680; Chromosome 5.
DR   ExpressionAtlas; Q0DKF0; baseline and differential.
DR   Genevisible; Q0DKF0; OS.
DR   GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR   GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR   GO; GO:0000027; P:ribosomal large subunit assembly; IBA:GO_Central.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   CDD; cd01433; Ribosomal_L16_L10e; 1.
DR   Gene3D; 3.90.1170.10; -; 1.
DR   InterPro; IPR001197; Ribosomal_L10e.
DR   InterPro; IPR016180; Ribosomal_L10e/L16.
DR   InterPro; IPR036920; Ribosomal_L10e/L16_sf.
DR   InterPro; IPR018255; Ribosomal_L10e_CS.
DR   PANTHER; PTHR11726; PTHR11726; 1.
DR   Pfam; PF00252; Ribosomal_L16; 1.
DR   PIRSF; PIRSF005590; Ribosomal_L10; 1.
DR   SUPFAM; SSF54686; SSF54686; 1.
DR   TIGRFAMs; TIGR00279; uL16_euk_arch; 1.
DR   PROSITE; PS01257; RIBOSOMAL_L10E; 1.
PE   2: Evidence at transcript level;
KW   Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT   CHAIN           1..219
FT                   /note="60S ribosomal protein L10-2"
FT                   /id="PRO_0000147120"
SQ   SEQUENCE   219 AA;  24672 MW;  CE57477068725DBF CRC64;
     MGRRPARCYR QIKNKPYPKS RYCRGVPDPK IRIYDVGMKK KGVDEFSHCV HLVSWEKENV
     TSEALEAARI ACNKYMTKSA GKDAFHLRVR VHPFHVLRIN KMLSCAGADR LQTGMRGAFG
     KPQGTCARVD IGQVLLSVRC KPNNAVHASE ALRRAKFKFP GRQKIIESRK WGFTKFSRDE
     YVRLKSEGRI MPDGVNAKLL GCHGRLSARA PGKAFLSAA
 
 
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