RL10_DICDI
ID RL10_DICDI Reviewed; 217 AA.
AC Q54J69;
DT 04-DEC-2007, integrated into UniProtKB/Swiss-Prot.
DT 04-DEC-2007, sequence version 2.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=60S ribosomal protein L10;
GN Name=rpl10; Synonyms=rpl10e; ORFNames=DDB_G0288273;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [2]
RP PROTEIN SEQUENCE OF 58-69; 129-139; 142-162 AND 199-211, AND IDENTIFICATION
RP BY MASS SPECTROMETRY.
RA Bienvenut W.V., Veltman D.M., Insall R.H.;
RL Submitted (JAN-2010) to UniProtKB.
CC -!- SUBUNIT: Component of the small ribosomal subunit. Mature ribosomes
CC consist of a small (40S) and a large (60S) subunit. The 40S subunit
CC contains about 33 different proteins and 1 molecule of RNA (18S). The
CC 60S subunit contains about 49 different proteins and 3 molecules of RNA
CC (25S, 5.8S and 5S) (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL16 family.
CC {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AAFI02000109; EAL63318.2; -; Genomic_DNA.
DR RefSeq; XP_636818.2; XM_631726.2.
DR PDB; 5AN9; EM; 3.30 A; F=1-217.
DR PDB; 5ANB; EM; 4.10 A; F=1-217.
DR PDB; 5ANC; EM; 4.20 A; F=1-217.
DR PDB; 6QKL; EM; 3.30 A; F=1-217.
DR PDBsum; 5AN9; -.
DR PDBsum; 5ANB; -.
DR PDBsum; 5ANC; -.
DR PDBsum; 6QKL; -.
DR AlphaFoldDB; Q54J69; -.
DR SMR; Q54J69; -.
DR STRING; 44689.DDB0231191; -.
DR PaxDb; Q54J69; -.
DR EnsemblProtists; EAL63318; EAL63318; DDB_G0288273.
DR GeneID; 8626535; -.
DR KEGG; ddi:DDB_G0288273; -.
DR dictyBase; DDB_G0288273; rpl10.
DR eggNOG; KOG0857; Eukaryota.
DR HOGENOM; CLU_084051_0_0_1; -.
DR InParanoid; Q54J69; -.
DR OMA; HHVIREN; -.
DR PhylomeDB; Q54J69; -.
DR Reactome; R-DDI-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR Reactome; R-DDI-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR Reactome; R-DDI-72689; Formation of a pool of free 40S subunits.
DR Reactome; R-DDI-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR Reactome; R-DDI-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-DDI-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR PRO; PR:Q54J69; -.
DR Proteomes; UP000002195; Chromosome 5.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005811; C:lipid droplet; HDA:dictyBase.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0000027; P:ribosomal large subunit assembly; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd01433; Ribosomal_L16_L10e; 1.
DR Gene3D; 3.90.1170.10; -; 1.
DR InterPro; IPR001197; Ribosomal_L10e.
DR InterPro; IPR016180; Ribosomal_L10e/L16.
DR InterPro; IPR036920; Ribosomal_L10e/L16_sf.
DR InterPro; IPR018255; Ribosomal_L10e_CS.
DR PANTHER; PTHR11726; PTHR11726; 1.
DR Pfam; PF00252; Ribosomal_L16; 1.
DR PIRSF; PIRSF005590; Ribosomal_L10; 1.
DR SUPFAM; SSF54686; SSF54686; 1.
DR TIGRFAMs; TIGR00279; uL16_euk_arch; 1.
DR PROSITE; PS01257; RIBOSOMAL_L10E; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Direct protein sequencing; Reference proteome;
KW Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..217
FT /note="60S ribosomal protein L10"
FT /id="PRO_0000311827"
FT HELIX 6..9
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 18..20
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 39..41
FT /evidence="ECO:0007829|PDB:5AN9"
FT TURN 43..45
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 48..56
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 59..61
FT /evidence="ECO:0007829|PDB:5AN9"
FT HELIX 62..73
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 75..80
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 95..99
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 105..107
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 110..113
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 121..128
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 133..140
FT /evidence="ECO:0007829|PDB:5AN9"
FT HELIX 147..158
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 159..161
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 163..167
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 172..175
FT /evidence="ECO:0007829|PDB:5AN9"
FT HELIX 179..187
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 194..197
FT /evidence="ECO:0007829|PDB:5AN9"
FT STRAND 202..204
FT /evidence="ECO:0007829|PDB:5AN9"
FT TURN 212..215
FT /evidence="ECO:0007829|PDB:5AN9"
SQ SEQUENCE 217 AA; 24545 MW; 56FE22F86744BF96 CRC64;
MGRRPARCYR YCKNKPYIKS RYCRGVPDAK IRIFDLGRKK ASTDEFPLCV HLISLEKEQL
SSEAIEAGRI SCNKYISKTG GKDSFHMRVR VHPWHVLRIN KMLSCAGADR LQTGMRGAFG
KPMGTVARVN IGQIIFSIRT RDNMLANVVE ALRRSSYKFP GRQKIVVSKK WGFTAYNREA
YQKLKADGRL MNDGANVKVI TNHGTLAQYA KDIAAAN
