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RL10_METJA
ID   RL10_METJA              Reviewed;         338 AA.
AC   P54049;
DT   01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT   15-JUL-1998, sequence version 2.
DT   25-MAY-2022, entry version 116.
DE   RecName: Full=50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00280};
DE   AltName: Full=Acidic ribosomal protein P0 homolog {ECO:0000255|HAMAP-Rule:MF_00280};
DE   AltName: Full=MjaL10;
GN   Name=rpl10 {ECO:0000255|HAMAP-Rule:MF_00280};
GN   Synonyms=rplP0 {ECO:0000255|HAMAP-Rule:MF_00280}; OrderedLocusNames=MJ0509;
OS   Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
OS   10045 / NBRC 100440) (Methanococcus jannaschii).
OC   Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC   Methanocaldococcaceae; Methanocaldococcus.
OX   NCBI_TaxID=243232;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440;
RX   PubMed=8688087; DOI=10.1126/science.273.5278.1058;
RA   Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G.,
RA   Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R.,
RA   Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R.,
RA   Kirkness E.F., Weinstock K.G., Merrick J.M., Glodek A., Scott J.L.,
RA   Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R.,
RA   Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D.,
RA   Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P.,
RA   Fraser C.M., Smith H.O., Woese C.R., Venter J.C.;
RT   "Complete genome sequence of the methanogenic archaeon, Methanococcus
RT   jannaschii.";
RL   Science 273:1058-1073(1996).
RN   [2]
RP   X-RAY CRYSTALLOGRAPHY (1.6 ANGSTROMS) OF 10-221.
RX   PubMed=20399793; DOI=10.1016/j.jmb.2010.04.017;
RA   Kravchenko O., Mitroshin I., Nikonov S., Piendl W., Garber M.;
RT   "Structure of a two-domain N-terminal fragment of ribosomal protein L10
RT   from Methanococcus jannaschii reveals a specific piece of the archaeal
RT   ribosomal stalk.";
RL   J. Mol. Biol. 399:214-220(2010).
CC   -!- FUNCTION: Forms part of the ribosomal stalk, playing a central role in
CC       the interaction of the ribosome with GTP-bound translation factors.
CC       {ECO:0000305}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. Forms part of the ribosomal
CC       stalk which helps the ribosome interact with GTP-bound translation
CC       factors. Forms a heptameric L10(L12)2(L12)2(L12)2 complex, where L10
CC       forms an elongated spine to which the L12 dimers bind in a sequential
CC       fashion (Probable). {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL10 family.
CC       {ECO:0000255|HAMAP-Rule:MF_00280}.
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DR   EMBL; L77117; AAB98499.1; -; Genomic_DNA.
DR   RefSeq; WP_010870010.1; NC_000909.1.
DR   PDB; 3JSY; X-ray; 1.60 A; A/B=10-221.
DR   PDB; 5D6G; X-ray; 3.30 A; A=10-221.
DR   PDB; 5D8H; X-ray; 2.80 A; B=9-221.
DR   PDB; 5DAR; X-ray; 2.90 A; B/E=10-221.
DR   PDBsum; 3JSY; -.
DR   PDBsum; 5D6G; -.
DR   PDBsum; 5D8H; -.
DR   PDBsum; 5DAR; -.
DR   AlphaFoldDB; P54049; -.
DR   SMR; P54049; -.
DR   STRING; 243232.MJ_0509; -.
DR   EnsemblBacteria; AAB98499; AAB98499; MJ_0509.
DR   GeneID; 1451371; -.
DR   KEGG; mja:MJ_0509; -.
DR   eggNOG; arCOG04288; Archaea.
DR   HOGENOM; CLU_053173_0_0_2; -.
DR   InParanoid; P54049; -.
DR   OMA; MAHVAEW; -.
DR   OrthoDB; 73593at2157; -.
DR   PhylomeDB; P54049; -.
DR   EvolutionaryTrace; P54049; -.
DR   Proteomes; UP000000805; Chromosome.
DR   GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR   GO; GO:0070180; F:large ribosomal subunit rRNA binding; IBA:GO_Central.
DR   GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR   GO; GO:0002181; P:cytoplasmic translation; IBA:GO_Central.
DR   GO; GO:0000027; P:ribosomal large subunit assembly; IBA:GO_Central.
DR   Gene3D; 3.30.70.1730; -; 1.
DR   Gene3D; 3.90.105.20; -; 1.
DR   HAMAP; MF_00280; Ribosomal_L10_arch; 1.
DR   InterPro; IPR022909; 50S_L10_arch.
DR   InterPro; IPR043141; Ribosomal_L10-like_sf.
DR   InterPro; IPR001790; Ribosomal_L10P.
DR   InterPro; IPR043164; RL10_insert_sf.
DR   InterPro; IPR040637; RL10P_insert.
DR   Pfam; PF00466; Ribosomal_L10; 1.
DR   Pfam; PF17777; RL10P_insert; 1.
DR   SUPFAM; SSF160369; SSF160369; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW   RNA-binding; rRNA-binding.
FT   CHAIN           1..338
FT                   /note="50S ribosomal protein L10"
FT                   /id="PRO_0000154793"
FT   REGION          303..338
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        309..330
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   HELIX           11..26
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   STRAND          27..34
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   HELIX           40..50
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   TURN            51..53
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   STRAND          54..58
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   HELIX           61..74
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   HELIX           78..86
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   STRAND          89..98
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   HELIX           100..109
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   STRAND          112..114
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   STRAND          126..128
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   STRAND          130..132
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   HELIX           140..146
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   STRAND          151..154
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   STRAND          157..160
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   STRAND          164..167
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   STRAND          169..171
FT                   /evidence="ECO:0007829|PDB:5D6G"
FT   HELIX           175..183
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   STRAND          189..192
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   STRAND          194..200
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   STRAND          203..205
FT                   /evidence="ECO:0007829|PDB:3JSY"
FT   HELIX           207..213
FT                   /evidence="ECO:0007829|PDB:3JSY"
SQ   SEQUENCE   338 AA;  36751 MW;  63A6AFD357E3052D CRC64;
     METKVKAHVA PWKIEEVKTL KGLIKSKPVV AIVDMMDVPA PQLQEIRDKI RDKVKLRMSR
     NTLIIRALKE AAEELNNPKL AELANYVERG AAILVTDMNP FKLYKLLEEN KSPAPVRGGQ
     IAPCDIKVEK GSTGMPPGPF LGELKSVGIP AAIEKGKIAI KEDKVVVKKG EVVSPKLAAV
     LDRLGIKPIK VGLNILAVYE DGIIYTPDVL KVDEEKLLAD IQAAYQNAFN LAFNTAYPAK
     EVLPFLIQKA FINARALSVE TAFVTKETAG DILAKAQAQA LALASKLPDE ALDEDIKAKL
     SSVEVSAAPA AEEEKEEEKK EEEKKEEDTG AAGLALLF
 
 
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