RL10_MYCS2
ID RL10_MYCS2 Reviewed; 175 AA.
AC A0QS62; I7FG00;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2007, sequence version 1.
DT 25-MAY-2022, entry version 94.
DE RecName: Full=50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00362};
GN Name=rplJ {ECO:0000255|HAMAP-Rule:MF_00362};
GN OrderedLocusNames=MSMEG_1364, MSMEI_1325;
OS Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium
OS smegmatis).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycolicibacterium.
OX NCBI_TaxID=246196;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RA Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C.,
RA Fraser C.M.;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=17295914; DOI=10.1186/gb-2007-8-2-r20;
RA Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C.,
RA Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.;
RT "Interrupted coding sequences in Mycobacterium smegmatis: authentic
RT mutations or sequencing errors?";
RL Genome Biol. 8:R20.1-R20.9(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND IDENTIFICATION BY MASS
RP SPECTROMETRY [LARGE SCALE ANALYSIS].
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=18955433; DOI=10.1101/gr.081901.108;
RA Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M.,
RA Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.;
RT "Ortho-proteogenomics: multiple proteomes investigation through orthology
RT and a new MS-based protocol.";
RL Genome Res. 19:128-135(2009).
CC -!- FUNCTION: Forms part of the ribosomal stalk, playing a central role in
CC the interaction of the ribosome with GTP-bound translation factors.
CC {ECO:0000255|HAMAP-Rule:MF_00362}.
CC -!- SUBUNIT: Part of the ribosomal stalk of the 50S ribosomal subunit. The
CC N-terminus interacts with L11 and the large rRNA to form the base of
CC the stalk. The C-terminus forms an elongated spine to which L12 dimers
CC bind in a sequential fashion forming a multimeric L10(L12)X complex.
CC {ECO:0000255|HAMAP-Rule:MF_00362}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL10 family.
CC {ECO:0000255|HAMAP-Rule:MF_00362}.
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DR EMBL; CP000480; ABK75311.1; -; Genomic_DNA.
DR EMBL; CP001663; AFP37798.1; -; Genomic_DNA.
DR RefSeq; WP_003892752.1; NZ_SIJM01000030.1.
DR RefSeq; YP_885750.1; NC_008596.1.
DR PDB; 5O60; EM; 3.20 A; I=1-175.
DR PDB; 5O61; EM; 3.31 A; I=1-175.
DR PDB; 5ZEB; EM; 3.40 A; I=1-175.
DR PDB; 5ZEP; EM; 3.40 A; I=1-175.
DR PDB; 5ZET; EM; 3.20 A; I=1-175.
DR PDB; 6DZI; EM; 3.46 A; I=1-126.
DR PDB; 6DZP; EM; 3.42 A; I=1-175.
DR PDBsum; 5O60; -.
DR PDBsum; 5O61; -.
DR PDBsum; 5ZEB; -.
DR PDBsum; 5ZEP; -.
DR PDBsum; 5ZET; -.
DR PDBsum; 6DZI; -.
DR PDBsum; 6DZP; -.
DR AlphaFoldDB; A0QS62; -.
DR SMR; A0QS62; -.
DR IntAct; A0QS62; 3.
DR STRING; 246196.MSMEI_1325; -.
DR PRIDE; A0QS62; -.
DR EnsemblBacteria; ABK75311; ABK75311; MSMEG_1364.
DR EnsemblBacteria; AFP37798; AFP37798; MSMEI_1325.
DR GeneID; 66732824; -.
DR KEGG; msg:MSMEI_1325; -.
DR KEGG; msm:MSMEG_1364; -.
DR PATRIC; fig|246196.19.peg.1348; -.
DR eggNOG; COG0244; Bacteria.
DR OMA; VRDQKQA; -.
DR OrthoDB; 1470978at2; -.
DR Proteomes; UP000000757; Chromosome.
DR Proteomes; UP000006158; Chromosome.
DR GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR GO; GO:0070180; F:large ribosomal subunit rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd05797; Ribosomal_L10; 1.
DR Gene3D; 3.30.70.1730; -; 1.
DR HAMAP; MF_00362; Ribosomal_L10; 1.
DR InterPro; IPR022973; Ribosomal_L10.
DR InterPro; IPR043141; Ribosomal_L10-like_sf.
DR InterPro; IPR002363; Ribosomal_L10_eubac_CS.
DR InterPro; IPR001790; Ribosomal_L10P.
DR PANTHER; PTHR11560; PTHR11560; 1.
DR Pfam; PF00466; Ribosomal_L10; 1.
DR SUPFAM; SSF160369; SSF160369; 1.
DR PROSITE; PS01109; RIBOSOMAL_L10; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..175
FT /note="50S ribosomal protein L10"
FT /id="PRO_1000005536"
FT HELIX 3..18
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 23..27
FT /evidence="ECO:0007829|PDB:5ZET"
FT HELIX 33..42
FT /evidence="ECO:0007829|PDB:5ZET"
FT TURN 44..46
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 47..51
FT /evidence="ECO:0007829|PDB:5ZET"
FT HELIX 54..60
FT /evidence="ECO:0007829|PDB:5ZET"
FT TURN 61..65
FT /evidence="ECO:0007829|PDB:5ZET"
FT HELIX 67..69
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 70..72
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 78..84
FT /evidence="ECO:0007829|PDB:5ZET"
FT HELIX 86..99
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 103..109
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 111..114
FT /evidence="ECO:0007829|PDB:5ZET"
FT HELIX 118..123
FT /evidence="ECO:0007829|PDB:5ZET"
SQ SEQUENCE 175 AA; 18011 MW; 49BE7312E43CC5F2 CRC64;
MAKADKATAV ADIAEQFKAS TATVVTEYRG LTVANLAELR RALGDSATYT VAKNTLVKRA
ASEAGIEGLD ELFAGPTAIA FVKGEAVDAA KAIKKFAKDN KALVIKGGYM DGKALSVADV
EKIADLESRE VLLAKLAGAM KGNLSKAAGL FNAPASQVAR LAAALQEKKA GEEAA
