RL11_METJA
ID RL11_METJA Reviewed; 161 AA.
AC P54030;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 25-MAY-2022, entry version 113.
DE RecName: Full=50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736};
GN Name=rpl11 {ECO:0000255|HAMAP-Rule:MF_00736}; OrderedLocusNames=MJ0373;
OS Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
OS 10045 / NBRC 100440) (Methanococcus jannaschii).
OC Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC Methanocaldococcaceae; Methanocaldococcus.
OX NCBI_TaxID=243232;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440;
RX PubMed=8688087; DOI=10.1126/science.273.5278.1058;
RA Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G.,
RA Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R.,
RA Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R.,
RA Kirkness E.F., Weinstock K.G., Merrick J.M., Glodek A., Scott J.L.,
RA Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R.,
RA Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D.,
RA Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P.,
RA Fraser C.M., Smith H.O., Woese C.R., Venter J.C.;
RT "Complete genome sequence of the methanogenic archaeon, Methanococcus
RT jannaschii.";
RL Science 273:1058-1073(1996).
CC -!- FUNCTION: Forms part of the ribosomal stalk which helps the ribosome
CC interact with GTP-bound translation factors. {ECO:0000255|HAMAP-
CC Rule:MF_00736}.
CC -!- SUBUNIT: Part of the ribosomal stalk of the 50S ribosomal subunit.
CC Interacts with L10 and the large rRNA to form the base of the stalk.
CC L10 forms an elongated spine to which L12 dimers bind in a sequential
CC fashion forming a multimeric L10(L12)X complex. {ECO:0000255|HAMAP-
CC Rule:MF_00736}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL11 family.
CC {ECO:0000255|HAMAP-Rule:MF_00736}.
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DR EMBL; L77117; AAB98362.1; -; Genomic_DNA.
DR PIR; E64346; E64346.
DR RefSeq; WP_010869872.1; NC_000909.1.
DR PDB; 5COL; X-ray; 2.25 A; A/B=1-161.
DR PDB; 5D8H; X-ray; 2.80 A; C=1-161.
DR PDB; 5DAR; X-ray; 2.90 A; C/F=1-161.
DR PDBsum; 5COL; -.
DR PDBsum; 5D8H; -.
DR PDBsum; 5DAR; -.
DR AlphaFoldDB; P54030; -.
DR SMR; P54030; -.
DR STRING; 243232.MJ_0373; -.
DR EnsemblBacteria; AAB98362; AAB98362; MJ_0373.
DR GeneID; 1451230; -.
DR KEGG; mja:MJ_0373; -.
DR eggNOG; arCOG04372; Archaea.
DR HOGENOM; CLU_074237_4_0_2; -.
DR InParanoid; P54030; -.
DR OMA; CKQFNAK; -.
DR OrthoDB; 98187at2157; -.
DR PhylomeDB; P54030; -.
DR Proteomes; UP000000805; Chromosome.
DR GO; GO:0015934; C:large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0070180; F:large ribosomal subunit rRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR CDD; cd00349; Ribosomal_L11; 1.
DR Gene3D; 1.10.10.250; -; 1.
DR Gene3D; 3.30.1550.10; -; 1.
DR HAMAP; MF_00736; Ribosomal_L11; 1.
DR InterPro; IPR000911; Ribosomal_L11/L12.
DR InterPro; IPR036796; Ribosomal_L11/L12_N_sf.
DR InterPro; IPR020783; Ribosomal_L11_C.
DR InterPro; IPR036769; Ribosomal_L11_C_sf.
DR InterPro; IPR020785; Ribosomal_L11_CS.
DR InterPro; IPR020784; Ribosomal_L11_N.
DR PANTHER; PTHR11661; PTHR11661; 1.
DR Pfam; PF00298; Ribosomal_L11; 1.
DR Pfam; PF03946; Ribosomal_L11_N; 1.
DR SMART; SM00649; RL11; 1.
DR SUPFAM; SSF46906; SSF46906; 1.
DR SUPFAM; SSF54747; SSF54747; 1.
DR PROSITE; PS00359; RIBOSOMAL_L11; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..161
FT /note="50S ribosomal protein L11"
FT /id="PRO_0000104435"
FT STRAND 3..11
FT /evidence="ECO:0007829|PDB:5COL"
FT STRAND 17..19
FT /evidence="ECO:0007829|PDB:5D8H"
FT HELIX 21..25
FT /evidence="ECO:0007829|PDB:5COL"
FT TURN 26..29
FT /evidence="ECO:0007829|PDB:5COL"
FT HELIX 32..42
FT /evidence="ECO:0007829|PDB:5COL"
FT HELIX 43..46
FT /evidence="ECO:0007829|PDB:5COL"
FT STRAND 49..58
FT /evidence="ECO:0007829|PDB:5COL"
FT TURN 59..61
FT /evidence="ECO:0007829|PDB:5COL"
FT STRAND 64..68
FT /evidence="ECO:0007829|PDB:5COL"
FT HELIX 73..81
FT /evidence="ECO:0007829|PDB:5COL"
FT STRAND 88..90
FT /evidence="ECO:0007829|PDB:5D8H"
FT STRAND 96..98
FT /evidence="ECO:0007829|PDB:5COL"
FT HELIX 100..113
FT /evidence="ECO:0007829|PDB:5COL"
FT HELIX 119..132
FT /evidence="ECO:0007829|PDB:5COL"
FT STRAND 135..137
FT /evidence="ECO:0007829|PDB:5COL"
FT HELIX 142..151
FT /evidence="ECO:0007829|PDB:5COL"
SQ SEQUENCE 161 AA; 17490 MW; 2B3B00332D110A81 CRC64;
MAKEVVEVLV TGGRATAGPP LGPAIGPLGV NVMQVVKEIN EKTKDYEGMQ VPVKVIVDTE
TRKFEIEVGI PPTTALIKKE LGIETAAHEP RHEVVGNLTL EQVIKIAKMK KDAMLSYTLK
NAVKEVLGTC GSMGVTVEGK DPKEVQKEID AGVYDEYFKE E