RL12_RAT
ID RL12_RAT Reviewed; 165 AA.
AC P23358;
DT 01-NOV-1991, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1991, sequence version 1.
DT 03-AUG-2022, entry version 160.
DE RecName: Full=60S ribosomal protein L12;
GN Name=Rpl12;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=Sprague-Dawley; TISSUE=Liver;
RX PubMed=1977388; DOI=10.1016/s0006-291x(05)80169-x;
RA Suzuki K., Olvera J., Wool I.G.;
RT "The primary structure of rat ribosomal protein L12.";
RL Biochem. Biophys. Res. Commun. 172:35-41(1990).
CC -!- FUNCTION: Binds directly to 26S ribosomal RNA.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL11 family.
CC {ECO:0000305}.
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DR EMBL; X53504; CAA37581.1; -; mRNA.
DR PIR; A36667; R7RT12.
DR RefSeq; NP_001102668.1; NM_001109198.1.
DR RefSeq; XP_006227318.1; XM_006227256.3.
DR RefSeq; XP_006256697.1; XM_006256635.3.
DR AlphaFoldDB; P23358; -.
DR SMR; P23358; -.
DR BioGRID; 271090; 4.
DR BioGRID; 3430786; 1.
DR IntAct; P23358; 5.
DR MINT; P23358; -.
DR STRING; 10116.ENSRNOP00000041462; -.
DR CarbonylDB; P23358; -.
DR iPTMnet; P23358; -.
DR PhosphoSitePlus; P23358; -.
DR jPOST; P23358; -.
DR PaxDb; P23358; -.
DR PRIDE; P23358; -.
DR Ensembl; ENSRNOT00000042736; ENSRNOP00000041462; ENSRNOG00000028993.
DR GeneID; 102555453; -.
DR GeneID; 499782; -.
DR KEGG; rno:102555453; -.
DR KEGG; rno:499782; -.
DR UCSC; RGD:1565106; rat.
DR CTD; 6136; -.
DR RGD; 1565106; Rpl12.
DR eggNOG; KOG0886; Eukaryota.
DR GeneTree; ENSGT00390000006922; -.
DR HOGENOM; CLU_074237_5_0_1; -.
DR InParanoid; P23358; -.
DR OMA; QPPHDVI; -.
DR OrthoDB; 1279477at2759; -.
DR PhylomeDB; P23358; -.
DR TreeFam; TF300123; -.
DR Reactome; R-RNO-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR Reactome; R-RNO-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR Reactome; R-RNO-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR Reactome; R-RNO-72689; Formation of a pool of free 40S subunits.
DR Reactome; R-RNO-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR Reactome; R-RNO-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-RNO-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR PRO; PR:P23358; -.
DR Proteomes; UP000002494; Chromosome X.
DR Bgee; ENSRNOG00000028993; Expressed in ovary and 19 other tissues.
DR ExpressionAtlas; P23358; baseline.
DR Genevisible; P23358; RN.
DR GO; GO:0005737; C:cytoplasm; ISO:RGD.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IDA:RGD.
DR GO; GO:0022626; C:cytosolic ribosome; ISO:RGD.
DR GO; GO:0015934; C:large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005730; C:nucleolus; ISO:RGD.
DR GO; GO:0005634; C:nucleus; ISO:RGD.
DR GO; GO:0014069; C:postsynaptic density; ISO:RGD.
DR GO; GO:0070180; F:large ribosomal subunit rRNA binding; IDA:RGD.
DR GO; GO:0003735; F:structural constituent of ribosome; ISO:RGD.
DR GO; GO:0045901; P:positive regulation of translational elongation; IDA:RGD.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR CDD; cd00349; Ribosomal_L11; 1.
DR Gene3D; 1.10.10.250; -; 1.
DR Gene3D; 3.30.1550.10; -; 1.
DR HAMAP; MF_00736; Ribosomal_L11; 1.
DR InterPro; IPR000911; Ribosomal_L11/L12.
DR InterPro; IPR036796; Ribosomal_L11/L12_N_sf.
DR InterPro; IPR020783; Ribosomal_L11_C.
DR InterPro; IPR036769; Ribosomal_L11_C_sf.
DR InterPro; IPR020785; Ribosomal_L11_CS.
DR InterPro; IPR020784; Ribosomal_L11_N.
DR PANTHER; PTHR11661; PTHR11661; 1.
DR Pfam; PF00298; Ribosomal_L11; 1.
DR Pfam; PF03946; Ribosomal_L11_N; 1.
DR SMART; SM00649; RL11; 1.
DR SUPFAM; SSF46906; SSF46906; 1.
DR SUPFAM; SSF54747; SSF54747; 1.
DR PROSITE; PS00359; RIBOSOMAL_L11; 1.
PE 2: Evidence at transcript level;
KW Acetylation; Isopeptide bond; Phosphoprotein; Reference proteome;
KW Ribonucleoprotein; Ribosomal protein; RNA-binding; Ubl conjugation.
FT CHAIN 1..165
FT /note="60S ribosomal protein L12"
FT /id="PRO_0000104458"
FT MOD_RES 38
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P30050"
FT MOD_RES 54
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000250|UniProtKB:P30050"
FT MOD_RES 165
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P30050"
FT CROSSLNK 40
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:P30050"
SQ SEQUENCE 165 AA; 17846 MW; 6F1C882B6F2350F9 CRC64;
MPPKFDPNEI KVVYLRCTGG EVGATSALAP KIGPLGLSPK KVGDDIAKAT GDWKGLRITV
KLTIQNRQAQ IEVVPSASAL IIKALKEPPR DRKKQKNIKH NGNITFDEIV NIARQMRHRS
LARELSGTIK EILGTAQSVG CNVDGRHPHD IIDDINSGAV ECPAS