RL13A_CAEEL
ID RL13A_CAEEL Reviewed; 202 AA.
AC Q27389;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 139.
DE RecName: Full=60S ribosomal protein L13a;
GN Name=rpl-16; ORFNames=M01F1.2;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=Bristol N2;
RA Cope M.J.T., Kendrick-Jones J.;
RL Submitted (AUG-1995) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL13 family.
CC {ECO:0000305}.
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DR EMBL; U31528; AAA74904.1; -; mRNA.
DR EMBL; Z46381; CAA86515.1; -; Genomic_DNA.
DR PIR; T23654; T23654.
DR RefSeq; NP_497721.1; NM_065320.7.
DR AlphaFoldDB; Q27389; -.
DR SMR; Q27389; -.
DR BioGRID; 40696; 89.
DR DIP; DIP-25636N; -.
DR STRING; 6239.M01F1.2.1; -.
DR EPD; Q27389; -.
DR PaxDb; Q27389; -.
DR PeptideAtlas; Q27389; -.
DR EnsemblMetazoa; M01F1.2.1; M01F1.2.1; WBGene00004428.
DR UCSC; M01F1.2.2; c. elegans.
DR WormBase; M01F1.2; CE01030; WBGene00004428; rpl-16.
DR eggNOG; KOG3204; Eukaryota.
DR GeneTree; ENSGT00390000010799; -.
DR HOGENOM; CLU_076922_0_0_1; -.
DR InParanoid; Q27389; -.
DR OMA; RGPFHHR; -.
DR OrthoDB; 1312756at2759; -.
DR PhylomeDB; Q27389; -.
DR Reactome; R-CEL-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR Reactome; R-CEL-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR Reactome; R-CEL-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR Reactome; R-CEL-72689; Formation of a pool of free 40S subunits.
DR Reactome; R-CEL-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR Reactome; R-CEL-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-CEL-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR SignaLink; Q27389; -.
DR PRO; PR:Q27389; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00004428; Expressed in germ line (C elegans) and 4 other tissues.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005840; C:ribosome; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0017148; P:negative regulation of translation; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd00392; Ribosomal_L13; 1.
DR Gene3D; 3.90.1180.10; -; 1.
DR HAMAP; MF_01366; Ribosomal_L13; 1.
DR InterPro; IPR005822; Ribosomal_L13.
DR InterPro; IPR023563; Ribosomal_L13_CS.
DR InterPro; IPR005755; Ribosomal_L13_euk/arc.
DR InterPro; IPR036899; Ribosomal_L13_sf.
DR PANTHER; PTHR11545; PTHR11545; 1.
DR PANTHER; PTHR11545:SF3; PTHR11545:SF3; 1.
DR Pfam; PF00572; Ribosomal_L13; 1.
DR SUPFAM; SSF52161; SSF52161; 1.
DR TIGRFAMs; TIGR01077; L13_A_E; 1.
DR PROSITE; PS00783; RIBOSOMAL_L13; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..202
FT /note="60S ribosomal protein L13a"
FT /id="PRO_0000133778"
SQ SEQUENCE 202 AA; 22994 MW; 08683D310767DCCC CRC64;
MGLSNRAIII DGKNHLLGRL ASIVAKKLLQ GDKVVVLRAE EIVISGNFHR SKLKYMSFLR
KRCNINPARG AFHYRAPGKI FWRTVRGMLP HKTNRGNEAL KNLRAYEGVP AKYQKTKSLH
APSASRFRLQ PRRKFCVVGR LSHEVGWQFQ DVVAKLEAKR KVKGAAYFEQ KKKMDKLAVQ
AKKNAAPKIA QYQKIIEALG YN