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RL13_AFIC5
ID   RL13_AFIC5              Reviewed;         154 AA.
AC   B6JGT5; F8BX50;
DT   14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT   16-DEC-2008, sequence version 1.
DT   25-MAY-2022, entry version 75.
DE   RecName: Full=50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366};
GN   Name=rplM {ECO:0000255|HAMAP-Rule:MF_01366};
GN   OrderedLocusNames=OCAR_5895, OCA5_c21230;
OS   Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5)
OS   (Oligotropha carboxidovorans).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC   Bradyrhizobiaceae; Afipia.
OX   NCBI_TaxID=504832;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 49405 / DSM 1227 / KCTC 32145 / OM5;
RX   PubMed=18539730; DOI=10.1128/jb.00614-08;
RA   Paul D., Bridges S., Burgess S.C., Dandass Y., Lawrence M.L.;
RT   "Genome sequence of the chemolithoautotrophic bacterium Oligotropha
RT   carboxidovorans OM5T.";
RL   J. Bacteriol. 190:5531-5532(2008).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 49405 / DSM 1227 / KCTC 32145 / OM5;
RX   PubMed=21742883; DOI=10.1128/jb.05619-11;
RA   Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G.,
RA   Meyer O.;
RT   "Complete genome sequences of the chemolithoautotrophic Oligotropha
RT   carboxidovorans strains OM4 and OM5.";
RL   J. Bacteriol. 193:5043-5043(2011).
CC   -!- FUNCTION: This protein is one of the early assembly proteins of the 50S
CC       ribosomal subunit, although it is not seen to bind rRNA by itself. It
CC       is important during the early stages of 50S assembly.
CC       {ECO:0000255|HAMAP-Rule:MF_01366}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC       Rule:MF_01366}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL13 family.
CC       {ECO:0000255|HAMAP-Rule:MF_01366}.
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DR   EMBL; CP001196; ACI93019.1; -; Genomic_DNA.
DR   EMBL; CP002826; AEI06827.1; -; Genomic_DNA.
DR   RefSeq; WP_012563046.1; NC_015684.1.
DR   AlphaFoldDB; B6JGT5; -.
DR   SMR; B6JGT5; -.
DR   STRING; 504832.OCAR_5895; -.
DR   EnsemblBacteria; AEI06827; AEI06827; OCA5_c21230.
DR   KEGG; oca:OCAR_5895; -.
DR   KEGG; ocg:OCA5_c21230; -.
DR   PATRIC; fig|504832.7.peg.2244; -.
DR   eggNOG; COG0102; Bacteria.
DR   HOGENOM; CLU_082184_2_0_5; -.
DR   OMA; DFVVIIN; -.
DR   OrthoDB; 1822215at2; -.
DR   Proteomes; UP000007730; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   CDD; cd00392; Ribosomal_L13; 1.
DR   Gene3D; 3.90.1180.10; -; 1.
DR   HAMAP; MF_01366; Ribosomal_L13; 1.
DR   InterPro; IPR005822; Ribosomal_L13.
DR   InterPro; IPR005823; Ribosomal_L13_bac-type.
DR   InterPro; IPR036899; Ribosomal_L13_sf.
DR   PANTHER; PTHR11545; PTHR11545; 1.
DR   Pfam; PF00572; Ribosomal_L13; 1.
DR   PIRSF; PIRSF002181; Ribosomal_L13; 1.
DR   SUPFAM; SSF52161; SSF52161; 1.
DR   TIGRFAMs; TIGR01066; rplM_bact; 1.
PE   3: Inferred from homology;
KW   Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT   CHAIN           1..154
FT                   /note="50S ribosomal protein L13"
FT                   /id="PRO_1000144159"
SQ   SEQUENCE   154 AA;  17135 MW;  65AE8615368304B1 CRC64;
     MKTFSAKPAE VNKKWVIIDA KGLVVGRLAT LVAMRLRGKH LPTYTPHVDC GDNVIVINAA
     QVVLTGRKRD NKMYYNHTGF IGGIKERSAK SILEGRFPER VLEKAIERMI PRGPLGRIQM
     GNLRVYAGAE HPHEAQNPEV VDIASLNRKN TRAA
 
 
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