RL13_CHICK
ID RL13_CHICK Reviewed; 211 AA.
AC P41125;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 2.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=60S ribosomal protein L13;
DE AltName: Full=Breast basic conserved protein 1;
GN Name=RPL13; Synonyms=BBC1;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Lens fibers;
RX PubMed=8840185;
RA Sawada K., Agata K., Eguchi G.;
RT "Characterization of terminally differentiated cell state by categorizing
RT cDNA clones derived from chicken lens fibers.";
RL Int. J. Dev. Biol. 40:531-535(1996).
CC -!- FUNCTION: Component of the ribosome, a large ribonucleoprotein complex
CC responsible for the synthesis of proteins in the cell. The small
CC ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the
CC encoded message by selecting cognate aminoacyl-transfer RNA (tRNA)
CC molecules. The large subunit (LSU) contains the ribosomal catalytic
CC site termed the peptidyl transferase center (PTC), which catalyzes the
CC formation of peptide bonds, thereby polymerizing the amino acids
CC delivered by tRNAs into a polypeptide chain. The nascent polypeptides
CC leave the ribosome through a tunnel in the LSU and interact with
CC protein factors that function in enzymatic processing, targeting, and
CC the membrane insertion of nascent chains at the exit of the ribosomal
CC tunnel. As part of the LSU, it is probably required for its formation
CC and the maturation of rRNAs. {ECO:0000250|UniProtKB:P26373}.
CC -!- SUBUNIT: Component of the 60S large ribosomal subunit (LSU).
CC {ECO:0000250|UniProtKB:P26373}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:P26373}.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL13 family.
CC {ECO:0000305}.
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DR EMBL; D26318; BAA05377.1; -; mRNA.
DR RefSeq; NP_990330.1; NM_204999.1.
DR AlphaFoldDB; P41125; -.
DR SMR; P41125; -.
DR STRING; 9031.ENSGALP00000009960; -.
DR PaxDb; P41125; -.
DR Ensembl; ENSGALT00000084093; ENSGALP00000062041; ENSGALG00000006179.
DR GeneID; 395849; -.
DR KEGG; gga:395849; -.
DR CTD; 6137; -.
DR VEuPathDB; HostDB:geneid_395849; -.
DR eggNOG; KOG3295; Eukaryota.
DR GeneTree; ENSGT00390000007818; -.
DR HOGENOM; CLU_075696_1_0_1; -.
DR InParanoid; P41125; -.
DR OMA; NQQIPHN; -.
DR OrthoDB; 1239434at2759; -.
DR PhylomeDB; P41125; -.
DR TreeFam; TF300073; -.
DR Reactome; R-GGA-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-GGA-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR PRO; PR:P41125; -.
DR Proteomes; UP000000539; Chromosome 11.
DR Bgee; ENSGALG00000006179; Expressed in granulocyte and 13 other tissues.
DR ExpressionAtlas; P41125; baseline and differential.
DR GO; GO:0005829; C:cytosol; ISS:UniProtKB.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005783; C:endoplasmic reticulum; IEA:Ensembl.
DR GO; GO:0005730; C:nucleolus; IEA:Ensembl.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0060348; P:bone development; IEA:Ensembl.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR HAMAP; MF_00499; Ribosomal_L13e; 1.
DR InterPro; IPR001380; Ribosomal_L13e.
DR InterPro; IPR018256; Ribosomal_L13e_CS.
DR PANTHER; PTHR11722; PTHR11722; 1.
DR Pfam; PF01294; Ribosomal_L13e; 1.
DR PROSITE; PS01104; RIBOSOMAL_L13E; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..211
FT /note="60S ribosomal protein L13"
FT /id="PRO_0000192922"
SQ SEQUENCE 211 AA; 24396 MW; C8F4E63F4197E732 CRC64;
MAPSRNGMIL KPHFHKDWQR RVATWFNQPA RKIRRRKARQ AKARRIAPRP VAGPIRPIVR
CPTVRYHKKV RAGRGFSLEE LKLAGINKRF ARTIGISVDP RRRNKSTESL QANVQRLKEY
RSKLILFPRK PSAPKKGDSS PEELKMATQL SGPVMPIRNV FKREKARVIS EEEKNFKAFA
SLRMARANAR LFGIRAKRAK EAAEQDVEKK K