ATPD_ILYTA
ID ATPD_ILYTA Reviewed; 174 AA.
AC Q8KRV1;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 25-MAY-2022, entry version 65.
DE RecName: Full=ATP synthase subunit delta, sodium ion specific {ECO:0000255|HAMAP-Rule:MF_01416};
DE AltName: Full=ATP synthase F(1) sector subunit delta {ECO:0000255|HAMAP-Rule:MF_01416};
DE AltName: Full=F-type ATPase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416};
DE Short=F-ATPase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416};
GN Name=atpH {ECO:0000255|HAMAP-Rule:MF_01416};
OS Ilyobacter tartaricus.
OC Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.
OX NCBI_TaxID=167644;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 1-30.
RC STRAIN=ATCC 35898 / DSM 2382;
RX PubMed=12531483; DOI=10.1016/s0167-4781(02)00625-5;
RA Meier T., von Ballmoos C., Neumann S., Kaim G.;
RT "Complete DNA sequence of the atp operon of the sodium-dependent F1Fo ATP
RT synthase from Ilyobacter tartaricus and identification of the encoded
RT subunits.";
RL Biochim. Biophys. Acta 1625:221-226(2003).
CC -!- FUNCTION: F(1)F(0) ATP synthase produces ATP from ADP in the presence
CC of a proton or sodium gradient. F-type ATPases consist of two
CC structural domains, F(1) containing the extramembraneous catalytic core
CC and F(0) containing the membrane proton channel, linked together by a
CC central stalk and a peripheral stalk. During catalysis, ATP synthesis
CC in the catalytic domain of F(1) is coupled via a rotary mechanism of
CC the central stalk subunits to proton translocation. {ECO:0000255|HAMAP-
CC Rule:MF_01416}.
CC -!- FUNCTION: This protein is part of the stalk that links CF(0) to CF(1).
CC It either transmits conformational changes from CF(0) to CF(1) or is
CC implicated in proton conduction. {ECO:0000255|HAMAP-Rule:MF_01416}.
CC -!- SUBUNIT: F-type ATPases have 2 components, F(1) - the catalytic core
CC - and F(0) - the membrane proton channel. F(1) has five subunits:
CC alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main
CC subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an
CC alternating ring which encloses part of the gamma chain. F(1) is
CC attached to F(0) by a central stalk formed by the gamma and epsilon
CC chains, while a peripheral stalk is formed by the delta and b chains.
CC {ECO:0000255|HAMAP-Rule:MF_01416}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-
CC Rule:MF_01416}; Peripheral membrane protein {ECO:0000255|HAMAP-
CC Rule:MF_01416}.
CC -!- MISCELLANEOUS: The ATPase of I.tartaricus is of special interest
CC because it uses sodium ions instead of protons as the physiological
CC coupling ion.
CC -!- SIMILARITY: Belongs to the ATPase delta chain family.
CC {ECO:0000255|HAMAP-Rule:MF_01416}.
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DR EMBL; AF522463; AAM94910.1; -; Genomic_DNA.
DR AlphaFoldDB; Q8KRV1; -.
DR SMR; Q8KRV1; -.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0045261; C:proton-transporting ATP synthase complex, catalytic core F(1); IEA:UniProtKB-KW.
DR GO; GO:0046933; F:proton-transporting ATP synthase activity, rotational mechanism; IEA:UniProtKB-UniRule.
DR GO; GO:0006814; P:sodium ion transport; IEA:UniProtKB-KW.
DR Gene3D; 1.10.520.20; -; 1.
DR HAMAP; MF_01416; ATP_synth_delta_bact; 1.
DR InterPro; IPR026015; ATP_synth_OSCP/delta_N_sf.
DR InterPro; IPR020781; ATPase_OSCP/d_CS.
DR InterPro; IPR000711; ATPase_OSCP/dsu.
DR PANTHER; PTHR11910; PTHR11910; 1.
DR Pfam; PF00213; OSCP; 1.
DR PRINTS; PR00125; ATPASEDELTA.
DR SUPFAM; SSF47928; SSF47928; 1.
DR TIGRFAMs; TIGR01145; ATP_synt_delta; 1.
DR PROSITE; PS00389; ATPASE_DELTA; 1.
PE 1: Evidence at protein level;
KW ATP synthesis; Cell inner membrane; Cell membrane; CF(1);
KW Direct protein sequencing; Hydrogen ion transport; Ion transport; Membrane;
KW Sodium; Sodium transport; Transport.
FT CHAIN 1..174
FT /note="ATP synthase subunit delta, sodium ion specific"
FT /id="PRO_0000371001"
SQ SEQUENCE 174 AA; 19962 MW; 824C453AC3320F96 CRC64;
MIEAQVGKRY AEAIYGIAEA NNKVKELYDS LNIVMELYKG DKEFKNLVDH PLVKKEEKKE
FINKVFSEFE KFSLDILCYL VEKNRLSYIR GVVAEYLKIY YTKNRIVDVE ATFAIEPSEK
QKAKLIEKLE KKTGKKVNLV IKINKAIIAG GIIKIGDEII DGSVRRQLDT VARG