RL13_PYRFU
ID RL13_PYRFU Reviewed; 142 AA.
AC Q8U0E6;
DT 28-NOV-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366};
DE AltName: Full=Large ribosomal subunit protein uL13;
GN Name=rpl13 {ECO:0000255|HAMAP-Rule:MF_01366}; OrderedLocusNames=PF1645;
OS Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=186497;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43587 / DSM 3638 / JCM 8422 / Vc1;
RX PubMed=10430560; DOI=10.1093/genetics/152.4.1299;
RA Maeder D.L., Weiss R.B., Dunn D.M., Cherry J.L., Gonzalez J.M.,
RA DiRuggiero J., Robb F.T.;
RT "Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P.
RT horikoshii inferred from complete genomic sequences.";
RL Genetics 152:1299-1305(1999).
RN [2] {ECO:0007744|PDB:4V6U}
RP STRUCTURE BY ELECTRON MICROSCOPY (6.60 ANGSTROMS) IN THE 70S RIBOSOME, AND
RP SUBUNIT.
RX PubMed=23222135; DOI=10.1093/nar/gks1259;
RA Armache J.P., Anger A.M., Marquez V., Franckenberg S., Frohlich T.,
RA Villa E., Berninghausen O., Thomm M., Arnold G.J., Beckmann R.,
RA Wilson D.N.;
RT "Promiscuous behaviour of archaeal ribosomal proteins: implications for
RT eukaryotic ribosome evolution.";
RL Nucleic Acids Res. 41:1284-1293(2013).
CC -!- FUNCTION: This protein is one of the early assembly proteins of the 50S
CC ribosomal subunit, although it is not seen to bind rRNA by itself. It
CC is important during the early stages of 50S assembly.
CC {ECO:0000255|HAMAP-Rule:MF_01366}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01366, ECO:0000269|PubMed:23222135}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL13 family.
CC {ECO:0000255|HAMAP-Rule:MF_01366}.
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DR EMBL; AE009950; AAL81769.1; -; Genomic_DNA.
DR RefSeq; WP_011012792.1; NZ_CP023154.1.
DR PDB; 4V4N; EM; 9.00 A; I=1-142.
DR PDB; 4V6U; EM; 6.60 A; BI=1-142.
DR PDBsum; 4V4N; -.
DR PDBsum; 4V6U; -.
DR AlphaFoldDB; Q8U0E6; -.
DR SMR; Q8U0E6; -.
DR STRING; 186497.PF1645; -.
DR PRIDE; Q8U0E6; -.
DR EnsemblBacteria; AAL81769; AAL81769; PF1645.
DR GeneID; 41713471; -.
DR KEGG; pfu:PF1645; -.
DR PATRIC; fig|186497.12.peg.1711; -.
DR eggNOG; arCOG04242; Archaea.
DR HOGENOM; CLU_076922_1_0_2; -.
DR OMA; GMLPWKT; -.
DR OrthoDB; 87367at2157; -.
DR PhylomeDB; Q8U0E6; -.
DR Proteomes; UP000001013; Chromosome.
DR GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00392; Ribosomal_L13; 1.
DR Gene3D; 3.90.1180.10; -; 1.
DR HAMAP; MF_01366; Ribosomal_L13; 1.
DR InterPro; IPR005822; Ribosomal_L13.
DR InterPro; IPR023563; Ribosomal_L13_CS.
DR InterPro; IPR005755; Ribosomal_L13_euk/arc.
DR InterPro; IPR036899; Ribosomal_L13_sf.
DR PANTHER; PTHR11545; PTHR11545; 1.
DR PANTHER; PTHR11545:SF3; PTHR11545:SF3; 1.
DR Pfam; PF00572; Ribosomal_L13; 1.
DR PIRSF; PIRSF002181; Ribosomal_L13; 1.
DR SUPFAM; SSF52161; SSF52161; 1.
DR TIGRFAMs; TIGR01077; L13_A_E; 1.
DR PROSITE; PS00783; RIBOSOMAL_L13; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..142
FT /note="50S ribosomal protein L13"
FT /id="PRO_0000261849"
SQ SEQUENCE 142 AA; 16312 MW; 7E4FB7DF05459E0A CRC64;
MRIINAEGLI LGRLASKVAK MLLEGEEVVI VNAEKAVITG NRDVIFKKYK QRTELRTLTN
PRRGPFYPKR SDEIVRRTIR GMLPWKTDRG RKAFKRLKVY VGIPKEFQGK ELETIIEAHV
SRLSRPKYVT VGEVAKFLGG KF
