RL13_RHOPA
ID RL13_RHOPA Reviewed; 154 AA.
AC Q6N651;
DT 21-FEB-2006, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 96.
DE RecName: Full=50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366};
DE AltName: Full=RRP-L13;
GN Name=rplM {ECO:0000255|HAMAP-Rule:MF_01366}; OrderedLocusNames=RPA2767;
OS Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Bradyrhizobiaceae; Rhodopseudomonas.
OX NCBI_TaxID=258594;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-98 / CGA009;
RX PubMed=14704707; DOI=10.1038/nbt923;
RA Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L.,
RA Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R.,
RA Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C.,
RA Harrison F.H., Gibson J., Harwood C.S.;
RT "Complete genome sequence of the metabolically versatile photosynthetic
RT bacterium Rhodopseudomonas palustris.";
RL Nat. Biotechnol. 22:55-61(2004).
RN [2]
RP IDENTIFICATION BY MASS SPECTROMETRY.
RC STRAIN=ATCC BAA-98 / CGA009;
RX PubMed=15473684; DOI=10.1021/pr049940z;
RA Strader M.B., VerBerkmoes N.C., Tabb D.L., Connelly H.M., Barton J.W.,
RA Bruce B.D., Pelletier D.A., Davison B.H., Hettich R.L., Larimer F.W.,
RA Hurst G.B.;
RT "Characterization of the 70S ribosome from Rhodopseudomonas palustris using
RT an integrated 'top-down' and 'bottom-up' mass spectrometric approach.";
RL J. Proteome Res. 3:965-978(2004).
CC -!- FUNCTION: This protein is one of the early assembly proteins of the 50S
CC ribosomal subunit, although it is not seen to bind rRNA by itself. It
CC is important during the early stages of 50S assembly.
CC {ECO:0000255|HAMAP-Rule:MF_01366}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01366}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL13 family.
CC {ECO:0000255|HAMAP-Rule:MF_01366}.
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DR EMBL; BX572601; CAE28209.1; -; Genomic_DNA.
DR RefSeq; WP_011158318.1; NC_005296.1.
DR AlphaFoldDB; Q6N651; -.
DR SMR; Q6N651; -.
DR IntAct; Q6N651; 1.
DR STRING; 258594.RPA2767; -.
DR PRIDE; Q6N651; -.
DR EnsemblBacteria; CAE28209; CAE28209; RPA2767.
DR GeneID; 66893844; -.
DR KEGG; rpa:RPA2767; -.
DR eggNOG; COG0102; Bacteria.
DR HOGENOM; CLU_082184_2_0_5; -.
DR OMA; DFVVIIN; -.
DR PhylomeDB; Q6N651; -.
DR BioCyc; RPAL258594:TX73_RS14130-MON; -.
DR Proteomes; UP000001426; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00392; Ribosomal_L13; 1.
DR Gene3D; 3.90.1180.10; -; 1.
DR HAMAP; MF_01366; Ribosomal_L13; 1.
DR InterPro; IPR005822; Ribosomal_L13.
DR InterPro; IPR005823; Ribosomal_L13_bac-type.
DR InterPro; IPR036899; Ribosomal_L13_sf.
DR PANTHER; PTHR11545; PTHR11545; 1.
DR Pfam; PF00572; Ribosomal_L13; 1.
DR PIRSF; PIRSF002181; Ribosomal_L13; 1.
DR SUPFAM; SSF52161; SSF52161; 1.
DR TIGRFAMs; TIGR01066; rplM_bact; 1.
PE 1: Evidence at protein level;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..154
FT /note="50S ribosomal protein L13"
FT /id="PRO_0000223973"
SQ SEQUENCE 154 AA; 17173 MW; 735BF9AF7AF3D77F CRC64;
MKTFSAKPAE VTKKWVIIDA TGLVVGRLAT LVAMRLRGKH LPTYTPHVDC GDNVIIINAS
KVVLTGRKRD NKVYYHHTGF IGGIKERSAK AILEGRFPER VVEKAIERMI PRGPLGRVQM
GNLRVYPGAE HPHEAQQPEK LDIGAMNRKN MRAA