RL13_RUBXD
ID RL13_RUBXD Reviewed; 143 AA.
AC Q1AU63;
DT 28-NOV-2006, integrated into UniProtKB/Swiss-Prot.
DT 28-NOV-2006, sequence version 2.
DT 25-MAY-2022, entry version 78.
DE RecName: Full=50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366};
GN Name=rplM {ECO:0000255|HAMAP-Rule:MF_01366}; OrderedLocusNames=Rxyl_2121;
OS Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1).
OC Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacteraceae;
OC Rubrobacter.
OX NCBI_TaxID=266117;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 9941 / NBRC 16129 / PRD-1;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S.,
RA Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P.;
RT "Complete sequence of Rubrobacter xylanophilus DSM 9941.";
RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: This protein is one of the early assembly proteins of the 50S
CC ribosomal subunit, although it is not seen to bind rRNA by itself. It
CC is important during the early stages of 50S assembly.
CC {ECO:0000255|HAMAP-Rule:MF_01366}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01366}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL13 family.
CC {ECO:0000255|HAMAP-Rule:MF_01366}.
CC -!- SEQUENCE CAUTION:
CC Sequence=ABG05065.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; CP000386; ABG05065.1; ALT_INIT; Genomic_DNA.
DR RefSeq; WP_041328259.1; NC_008148.1.
DR AlphaFoldDB; Q1AU63; -.
DR SMR; Q1AU63; -.
DR STRING; 266117.Rxyl_2121; -.
DR EnsemblBacteria; ABG05065; ABG05065; Rxyl_2121.
DR KEGG; rxy:Rxyl_2121; -.
DR eggNOG; COG0102; Bacteria.
DR HOGENOM; CLU_082184_2_2_11; -.
DR OrthoDB; 1822215at2; -.
DR PhylomeDB; Q1AU63; -.
DR Proteomes; UP000006637; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00392; Ribosomal_L13; 1.
DR Gene3D; 3.90.1180.10; -; 1.
DR HAMAP; MF_01366; Ribosomal_L13; 1.
DR InterPro; IPR005822; Ribosomal_L13.
DR InterPro; IPR005823; Ribosomal_L13_bac-type.
DR InterPro; IPR036899; Ribosomal_L13_sf.
DR PANTHER; PTHR11545; PTHR11545; 1.
DR Pfam; PF00572; Ribosomal_L13; 1.
DR PIRSF; PIRSF002181; Ribosomal_L13; 1.
DR SUPFAM; SSF52161; SSF52161; 1.
DR TIGRFAMs; TIGR01066; rplM_bact; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..143
FT /note="50S ribosomal protein L13"
FT /id="PRO_0000261788"
SQ SEQUENCE 143 AA; 16667 MW; 79E951E51BDF38AA CRC64;
MKSYMARPGE VERKWYVIDA EGKTLGRLAA EISRLLRGKN KPQYTPHVDV GDFVVVVNAD
KVEVTGRKAE QKVYRWHTGY PGGLRERSYR QMLRKRPEEI LRQAVRGMMP KTRLARRQLK
KLRIYAGPEH PHAGQTPEPY EVR