RL13_STAA8
ID RL13_STAA8 Reviewed; 145 AA.
AC Q2FW38;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 21-MAR-2006, sequence version 1.
DT 25-MAY-2022, entry version 102.
DE RecName: Full=50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366};
GN Name=rplM {ECO:0000255|HAMAP-Rule:MF_01366};
GN OrderedLocusNames=SAOUHSC_02478;
OS Staphylococcus aureus (strain NCTC 8325 / PS 47).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae;
OC Staphylococcus.
OX NCBI_TaxID=93061;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCTC 8325 / PS 47;
RA Gillaspy A.F., Worrell V., Orvis J., Roe B.A., Dyer D.W., Iandolo J.J.;
RT "The Staphylococcus aureus NCTC 8325 genome.";
RL (In) Fischetti V., Novick R., Ferretti J., Portnoy D., Rood J. (eds.);
RL Gram positive pathogens, 2nd edition, pp.381-412, ASM Press, Washington
RL D.C. (2006).
CC -!- FUNCTION: This protein is one of the early assembly proteins of the 50S
CC ribosomal subunit, although it is not seen to bind rRNA by itself. It
CC is important during the early stages of 50S assembly.
CC {ECO:0000255|HAMAP-Rule:MF_01366}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01366}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL13 family.
CC {ECO:0000255|HAMAP-Rule:MF_01366}.
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DR EMBL; CP000253; ABD31498.1; -; Genomic_DNA.
DR RefSeq; WP_001250038.1; NZ_LS483365.1.
DR RefSeq; YP_500947.1; NC_007795.1.
DR PDB; 4WCE; X-ray; 3.53 A; G=1-145.
DR PDB; 4WF9; X-ray; 3.43 A; G=1-145.
DR PDB; 4WFA; X-ray; 3.39 A; G=1-145.
DR PDB; 4WFB; X-ray; 3.43 A; G=1-145.
DR PDB; 5HKV; X-ray; 3.66 A; G=1-145.
DR PDB; 5HL7; X-ray; 3.55 A; G=1-145.
DR PDB; 5LI0; EM; 3.80 A; M=1-145.
DR PDB; 5ND8; EM; 3.70 A; M=1-145.
DR PDB; 5ND9; EM; 3.70 A; M=1-145.
DR PDB; 5NRG; X-ray; 3.44 A; G=1-145.
DR PDB; 5TCU; EM; 3.90 A; LM=1-145.
DR PDB; 6DDD; EM; 3.10 A; V=1-145.
DR PDB; 6DDG; EM; 3.10 A; V=1-145.
DR PDB; 6HMA; EM; 2.65 A; H=1-145.
DR PDB; 6SJ6; EM; 3.23 A; M=1-145.
DR PDB; 6WQN; EM; 2.90 A; V=1-145.
DR PDB; 6WQQ; EM; 3.10 A; V=1-145.
DR PDB; 6WRS; EM; 3.20 A; V=1-145.
DR PDB; 6WRU; EM; 3.10 A; V=1-145.
DR PDB; 6YEF; EM; 3.20 A; M=1-145.
DR PDB; 7NHL; EM; 3.10 A; M=1-145.
DR PDB; 7NHM; EM; 3.10 A; M=1-145.
DR PDBsum; 4WCE; -.
DR PDBsum; 4WF9; -.
DR PDBsum; 4WFA; -.
DR PDBsum; 4WFB; -.
DR PDBsum; 5HKV; -.
DR PDBsum; 5HL7; -.
DR PDBsum; 5LI0; -.
DR PDBsum; 5ND8; -.
DR PDBsum; 5ND9; -.
DR PDBsum; 5NRG; -.
DR PDBsum; 5TCU; -.
DR PDBsum; 6DDD; -.
DR PDBsum; 6DDG; -.
DR PDBsum; 6HMA; -.
DR PDBsum; 6SJ6; -.
DR PDBsum; 6WQN; -.
DR PDBsum; 6WQQ; -.
DR PDBsum; 6WRS; -.
DR PDBsum; 6WRU; -.
DR PDBsum; 6YEF; -.
DR PDBsum; 7NHL; -.
DR PDBsum; 7NHM; -.
DR AlphaFoldDB; Q2FW38; -.
DR SMR; Q2FW38; -.
DR IntAct; Q2FW38; 2.
DR STRING; 1280.SAXN108_2468; -.
DR EnsemblBacteria; ABD31498; ABD31498; SAOUHSC_02478.
DR GeneID; 3920856; -.
DR GeneID; 66840430; -.
DR KEGG; sao:SAOUHSC_02478; -.
DR PATRIC; fig|93061.5.peg.2235; -.
DR eggNOG; COG0102; Bacteria.
DR HOGENOM; CLU_082184_2_2_9; -.
DR OMA; DFVVIIN; -.
DR PRO; PR:Q2FW38; -.
DR Proteomes; UP000008816; Chromosome.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005840; C:ribosome; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0017148; P:negative regulation of translation; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00392; Ribosomal_L13; 1.
DR Gene3D; 3.90.1180.10; -; 1.
DR HAMAP; MF_01366; Ribosomal_L13; 1.
DR InterPro; IPR005822; Ribosomal_L13.
DR InterPro; IPR005823; Ribosomal_L13_bac-type.
DR InterPro; IPR023563; Ribosomal_L13_CS.
DR InterPro; IPR036899; Ribosomal_L13_sf.
DR PANTHER; PTHR11545; PTHR11545; 1.
DR Pfam; PF00572; Ribosomal_L13; 1.
DR PIRSF; PIRSF002181; Ribosomal_L13; 1.
DR SUPFAM; SSF52161; SSF52161; 1.
DR TIGRFAMs; TIGR01066; rplM_bact; 1.
DR PROSITE; PS00783; RIBOSOMAL_L13; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..145
FT /note="50S ribosomal protein L13"
FT /id="PRO_1000055477"
FT TURN 9..11
FT /evidence="ECO:0007829|PDB:6DDD"
FT STRAND 16..19
FT /evidence="ECO:0007829|PDB:6HMA"
FT HELIX 26..38
FT /evidence="ECO:0007829|PDB:6HMA"
FT TURN 39..41
FT /evidence="ECO:0007829|PDB:6HMA"
FT STRAND 47..49
FT /evidence="ECO:0007829|PDB:6DDG"
FT STRAND 54..57
FT /evidence="ECO:0007829|PDB:6HMA"
FT HELIX 60..62
FT /evidence="ECO:0007829|PDB:6WQN"
FT TURN 67..71
FT /evidence="ECO:0007829|PDB:6HMA"
FT STRAND 74..78
FT /evidence="ECO:0007829|PDB:6HMA"
FT STRAND 80..83
FT /evidence="ECO:0007829|PDB:6SJ6"
FT STRAND 85..89
FT /evidence="ECO:0007829|PDB:6HMA"
FT HELIX 90..95
FT /evidence="ECO:0007829|PDB:6HMA"
FT HELIX 99..107
FT /evidence="ECO:0007829|PDB:6HMA"
FT HELIX 114..119
FT /evidence="ECO:0007829|PDB:6HMA"
FT HELIX 120..122
FT /evidence="ECO:0007829|PDB:6HMA"
FT STRAND 123..125
FT /evidence="ECO:0007829|PDB:6HMA"
FT STRAND 127..129
FT /evidence="ECO:0007829|PDB:6HMA"
FT HELIX 134..136
FT /evidence="ECO:0007829|PDB:6WQN"
SQ SEQUENCE 145 AA; 16333 MW; 9757E9AF942BC042 CRC64;
MRQTFMANES NIERKWYVID AEGQTLGRLS SEVASILRGK NKVTYTPHVD TGDYVIVINA
SKIEFTGNKE TDKVYYRHSN HPGGIKSITA GELRRTNPER LIENSIKGML PSTRLGEKQG
KKLFVYGGAE HPHAAQQPEN YELRG
