RL13_SYNJA
ID RL13_SYNJA Reviewed; 151 AA.
AC Q2JUJ8;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 07-MAR-2006, sequence version 1.
DT 25-MAY-2022, entry version 88.
DE RecName: Full=50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366};
GN Name=rplM {ECO:0000255|HAMAP-Rule:MF_01366};
GN Synonyms=rpl13 {ECO:0000255|HAMAP-Rule:MF_01366};
GN OrderedLocusNames=CYA_1448;
OS Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone
OS A-Prime).
OC Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus;
OC unclassified Synechococcus.
OX NCBI_TaxID=321327;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JA-3-3Ab;
RX PubMed=18059494; DOI=10.1038/ismej.2007.46;
RA Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N.,
RA Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.;
RT "Population level functional diversity in a microbial community revealed by
RT comparative genomic and metagenomic analyses.";
RL ISME J. 1:703-713(2007).
CC -!- FUNCTION: This protein is one of the early assembly proteins of the 50S
CC ribosomal subunit, although it is not seen to bind rRNA by itself. It
CC is important during the early stages of 50S assembly.
CC {ECO:0000255|HAMAP-Rule:MF_01366}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01366}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL13 family.
CC {ECO:0000255|HAMAP-Rule:MF_01366}.
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DR EMBL; CP000239; ABC99616.1; -; Genomic_DNA.
DR RefSeq; WP_011430294.1; NC_007775.1.
DR AlphaFoldDB; Q2JUJ8; -.
DR SMR; Q2JUJ8; -.
DR STRING; 321327.CYA_1448; -.
DR EnsemblBacteria; ABC99616; ABC99616; CYA_1448.
DR KEGG; cya:CYA_1448; -.
DR eggNOG; COG0102; Bacteria.
DR HOGENOM; CLU_082184_2_2_3; -.
DR OMA; DFVVIIN; -.
DR OrthoDB; 1822215at2; -.
DR Proteomes; UP000008818; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00392; Ribosomal_L13; 1.
DR Gene3D; 3.90.1180.10; -; 1.
DR HAMAP; MF_01366; Ribosomal_L13; 1.
DR InterPro; IPR005822; Ribosomal_L13.
DR InterPro; IPR005823; Ribosomal_L13_bac-type.
DR InterPro; IPR023563; Ribosomal_L13_CS.
DR InterPro; IPR036899; Ribosomal_L13_sf.
DR PANTHER; PTHR11545; PTHR11545; 1.
DR Pfam; PF00572; Ribosomal_L13; 1.
DR PIRSF; PIRSF002181; Ribosomal_L13; 1.
DR SUPFAM; SSF52161; SSF52161; 1.
DR TIGRFAMs; TIGR01066; rplM_bact; 1.
DR PROSITE; PS00783; RIBOSOMAL_L13; 1.
PE 3: Inferred from homology;
KW Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..151
FT /note="50S ribosomal protein L13"
FT /id="PRO_1000055480"
SQ SEQUENCE 151 AA; 17040 MW; F35125E6B3EC197C CRC64;
MNTTPVPPPE TLTPRWYLVD AANQRLGRLA VVVAKLLRGK HKPNFTPHLD TGDYVIVINA
EKVVVTGKKR TQKLYRRHSG RPGGMKVETF AQLQARLPER VIEKAVKGML PHTRLGRRQF
TKLKVYAGPH HPHEAQQPQV YPIHTIPGAK V