ID   RL13_THEKO              Reviewed;         142 AA.
AC   Q5JJF6;
DT   28-NOV-2006, integrated into UniProtKB/Swiss-Prot.
DT   15-FEB-2005, sequence version 1.
DT   25-MAY-2022, entry version 90.
DE   RecName: Full=50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366};
GN   Name=rpl13 {ECO:0000255|HAMAP-Rule:MF_01366}; OrderedLocusNames=TK1501;
OS   Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
OS   (Pyrococcus kodakaraensis (strain KOD1)).
OC   Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC   Thermococcus.
OX   NCBI_TaxID=69014;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-918 / JCM 12380 / KOD1;
RX   PubMed=15710748; DOI=10.1101/gr.3003105;
RA   Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.;
RT   "Complete genome sequence of the hyperthermophilic archaeon Thermococcus
RT   kodakaraensis KOD1 and comparison with Pyrococcus genomes.";
RL   Genome Res. 15:352-363(2005).
CC   -!- FUNCTION: This protein is one of the early assembly proteins of the 50S
CC       ribosomal subunit, although it is not seen to bind rRNA by itself. It
CC       is important during the early stages of 50S assembly.
CC       {ECO:0000255|HAMAP-Rule:MF_01366}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC       Rule:MF_01366}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL13 family.
CC       {ECO:0000255|HAMAP-Rule:MF_01366}.
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DR   EMBL; AP006878; BAD85690.1; -; Genomic_DNA.
DR   RefSeq; WP_011250452.1; NC_006624.1.
DR   PDB; 6SKF; EM; 2.95 A; BK=1-142.
DR   PDB; 6SKG; EM; 2.65 A; BK=1-142.
DR   PDB; 6TH6; EM; 2.55 A; BK=1-142.
DR   PDBsum; 6SKF; -.
DR   PDBsum; 6SKG; -.
DR   PDBsum; 6TH6; -.
DR   AlphaFoldDB; Q5JJF6; -.
DR   SMR; Q5JJF6; -.
DR   STRING; 69014.TK1501; -.
DR   EnsemblBacteria; BAD85690; BAD85690; TK1501.
DR   GeneID; 3234826; -.
DR   KEGG; tko:TK1501; -.
DR   PATRIC; fig|69014.16.peg.1461; -.
DR   eggNOG; arCOG04242; Archaea.
DR   HOGENOM; CLU_076922_1_0_2; -.
DR   InParanoid; Q5JJF6; -.
DR   OMA; GMLPWKT; -.
DR   OrthoDB; 87367at2157; -.
DR   PhylomeDB; Q5JJF6; -.
DR   Proteomes; UP000000536; Chromosome.
DR   GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR   GO; GO:0005840; C:ribosome; IBA:GO_Central.
DR   GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR   GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR   GO; GO:0017148; P:negative regulation of translation; IBA:GO_Central.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   CDD; cd00392; Ribosomal_L13; 1.
DR   Gene3D; 3.90.1180.10; -; 1.
DR   HAMAP; MF_01366; Ribosomal_L13; 1.
DR   InterPro; IPR005822; Ribosomal_L13.
DR   InterPro; IPR023563; Ribosomal_L13_CS.
DR   InterPro; IPR005755; Ribosomal_L13_euk/arc.
DR   InterPro; IPR036899; Ribosomal_L13_sf.
DR   PANTHER; PTHR11545; PTHR11545; 1.
DR   PANTHER; PTHR11545:SF3; PTHR11545:SF3; 1.
DR   Pfam; PF00572; Ribosomal_L13; 1.
DR   PIRSF; PIRSF002181; Ribosomal_L13; 1.
DR   SUPFAM; SSF52161; SSF52161; 1.
DR   TIGRFAMs; TIGR01077; L13_A_E; 1.
DR   PROSITE; PS00783; RIBOSOMAL_L13; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT   CHAIN           1..142
FT                   /note="50S ribosomal protein L13"
FT                   /id="PRO_0000261850"
SQ   SEQUENCE   142 AA;  16284 MW;  C58B39550CD1CD48 CRC64;
     MRIINAEGLI LGRLASKVAK MLLEGEEVVI VNAEKAIITG NREDIFAKYK QRTELRTRTN
     PRRGPFYPKR SDEIVRRTVR GMLPWKTDRG RKAFKRLKVY VGVPKEFEGK EFETISEAHM
     SRLATPKYVT VGEVAKFLGG KF