RL13_THET2
ID RL13_THET2 Reviewed; 140 AA.
AC Q72IN1;
DT 28-NOV-2006, integrated into UniProtKB/Swiss-Prot.
DT 28-NOV-2006, sequence version 2.
DT 25-MAY-2022, entry version 103.
DE RecName: Full=50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366};
GN Name=rplM {ECO:0000255|HAMAP-Rule:MF_01366}; OrderedLocusNames=TT_C1101;
OS Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27).
OC Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.
OX NCBI_TaxID=262724;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-163 / DSM 7039 / HB27;
RX PubMed=15064768; DOI=10.1038/nbt956;
RA Henne A., Brueggemann H., Raasch C., Wiezer A., Hartsch T., Liesegang H.,
RA Johann A., Lienard T., Gohl O., Martinez-Arias R., Jacobi C.,
RA Starkuviene V., Schlenczeck S., Dencker S., Huber R., Klenk H.-P.,
RA Kramer W., Merkl R., Gottschalk G., Fritz H.-J.;
RT "The genome sequence of the extreme thermophile Thermus thermophilus.";
RL Nat. Biotechnol. 22:547-553(2004).
CC -!- FUNCTION: This protein is one of the early assembly proteins of the 50S
CC ribosomal subunit, although it is not seen to bind rRNA by itself. It
CC is important during the early stages of 50S assembly.
CC {ECO:0000255|HAMAP-Rule:MF_01366}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01366}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL13 family.
CC {ECO:0000255|HAMAP-Rule:MF_01366}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAS81443.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AE017221; AAS81443.1; ALT_INIT; Genomic_DNA.
DR RefSeq; WP_011173515.1; NC_005835.1.
DR PDB; 4V4I; X-ray; 3.71 A; H=2-140.
DR PDB; 4V4J; X-ray; 3.83 A; H=2-140.
DR PDB; 4V63; X-ray; 3.21 A; BN/DN=2-140.
DR PDB; 4V67; X-ray; 3.00 A; BN/DN=2-140.
DR PDB; 4V7P; X-ray; 3.62 A; BJ/CJ=2-140.
DR PDB; 4V83; X-ray; 3.50 A; BJ/DJ=2-138.
DR PDB; 4V84; X-ray; 3.40 A; BJ/DJ=2-138.
DR PDB; 4V9J; X-ray; 3.86 A; BN/DN=1-138.
DR PDB; 4V9K; X-ray; 3.50 A; BN/DN=1-138.
DR PDB; 4V9L; X-ray; 3.50 A; BN/DN=1-138.
DR PDB; 4V9M; X-ray; 4.00 A; BN/DN=1-138.
DR PDB; 4V9N; X-ray; 3.40 A; BN/DN=2-138.
DR PDB; 4V9Q; X-ray; 3.40 A; AJ/CJ=2-138.
DR PDB; 4W29; X-ray; 3.80 A; BN/DN=1-139.
DR PDB; 4XEJ; X-ray; 3.80 A; AL13/BL13=2-138.
DR PDB; 5J4D; X-ray; 3.10 A; K/PB=1-140.
DR PDBsum; 4V4I; -.
DR PDBsum; 4V4J; -.
DR PDBsum; 4V63; -.
DR PDBsum; 4V67; -.
DR PDBsum; 4V7P; -.
DR PDBsum; 4V83; -.
DR PDBsum; 4V84; -.
DR PDBsum; 4V9J; -.
DR PDBsum; 4V9K; -.
DR PDBsum; 4V9L; -.
DR PDBsum; 4V9M; -.
DR PDBsum; 4V9N; -.
DR PDBsum; 4V9Q; -.
DR PDBsum; 4W29; -.
DR PDBsum; 4XEJ; -.
DR PDBsum; 5J4D; -.
DR AlphaFoldDB; Q72IN1; -.
DR SMR; Q72IN1; -.
DR IntAct; Q72IN1; 4.
DR STRING; 262724.TT_C1101; -.
DR EnsemblBacteria; AAS81443; AAS81443; TT_C1101.
DR GeneID; 3168485; -.
DR KEGG; tth:TT_C1101; -.
DR eggNOG; COG0102; Bacteria.
DR HOGENOM; CLU_082184_2_2_0; -.
DR OMA; DFVVIIN; -.
DR OrthoDB; 1822215at2; -.
DR EvolutionaryTrace; Q72IN1; -.
DR Proteomes; UP000000592; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00392; Ribosomal_L13; 1.
DR Gene3D; 3.90.1180.10; -; 1.
DR HAMAP; MF_01366; Ribosomal_L13; 1.
DR InterPro; IPR005822; Ribosomal_L13.
DR InterPro; IPR005823; Ribosomal_L13_bac-type.
DR InterPro; IPR023563; Ribosomal_L13_CS.
DR InterPro; IPR036899; Ribosomal_L13_sf.
DR PANTHER; PTHR11545; PTHR11545; 1.
DR Pfam; PF00572; Ribosomal_L13; 1.
DR PIRSF; PIRSF002181; Ribosomal_L13; 1.
DR SUPFAM; SSF52161; SSF52161; 1.
DR TIGRFAMs; TIGR01066; rplM_bact; 1.
DR PROSITE; PS00783; RIBOSOMAL_L13; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..140
FT /note="50S ribosomal protein L13"
FT /id="PRO_0000261816"
FT STRAND 14..16
FT /evidence="ECO:0007829|PDB:4V63"
FT HELIX 23..34
FT /evidence="ECO:0007829|PDB:4V67"
FT HELIX 36..38
FT /evidence="ECO:0007829|PDB:4V63"
FT TURN 44..46
FT /evidence="ECO:0007829|PDB:4V67"
FT STRAND 52..54
FT /evidence="ECO:0007829|PDB:4V63"
FT HELIX 57..59
FT /evidence="ECO:0007829|PDB:4V67"
FT HELIX 66..69
FT /evidence="ECO:0007829|PDB:4V67"
FT STRAND 71..73
FT /evidence="ECO:0007829|PDB:4V63"
FT STRAND 84..86
FT /evidence="ECO:0007829|PDB:4V63"
FT HELIX 87..92
FT /evidence="ECO:0007829|PDB:4V67"
FT HELIX 96..104
FT /evidence="ECO:0007829|PDB:4V67"
FT HELIX 111..118
FT /evidence="ECO:0007829|PDB:4V67"
FT STRAND 120..122
FT /evidence="ECO:0007829|PDB:4V63"
FT STRAND 124..126
FT /evidence="ECO:0007829|PDB:4V67"
SQ SEQUENCE 140 AA; 15895 MW; 657212AE35E6F502 CRC64;
MKTYVPKQVE PRWVLIDAEG KTLGRLATKI ATLLRGKHRP DWTPNVAMGD FVVVVNADKI
RVTGKKLEQK IYTRYSGYPG GLKKIPLEKM LATHPERVLE HAVKGMLPKG PLGRRLFKRL
KVYAGPDHPH QAQRPEKLEV
