RL16_MYCS2
ID RL16_MYCS2 Reviewed; 138 AA.
AC A0QSD8; I7F8J5;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2007, sequence version 1.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=50S ribosomal protein L16 {ECO:0000255|HAMAP-Rule:MF_01342};
GN Name=rplP {ECO:0000255|HAMAP-Rule:MF_01342};
GN OrderedLocusNames=MSMEG_1443, MSMEI_1407;
OS Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium
OS smegmatis).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycolicibacterium.
OX NCBI_TaxID=246196;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RA Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C.,
RA Fraser C.M.;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=17295914; DOI=10.1186/gb-2007-8-2-r20;
RA Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C.,
RA Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.;
RT "Interrupted coding sequences in Mycobacterium smegmatis: authentic
RT mutations or sequencing errors?";
RL Genome Biol. 8:R20.1-R20.9(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], IDENTIFICATION BY MASS
RP SPECTROMETRY [LARGE SCALE ANALYSIS], AND IDENTIFICATION OF N-TERMINUS.
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=18955433; DOI=10.1101/gr.081901.108;
RA Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M.,
RA Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.;
RT "Ortho-proteogenomics: multiple proteomes investigation through orthology
RT and a new MS-based protocol.";
RL Genome Res. 19:128-135(2009).
CC -!- FUNCTION: Binds 23S rRNA and is also seen to make contacts with the A
CC and possibly P site tRNAs. {ECO:0000255|HAMAP-Rule:MF_01342}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01342}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL16 family.
CC {ECO:0000255|HAMAP-Rule:MF_01342}.
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DR EMBL; CP000480; ABK74245.1; -; Genomic_DNA.
DR EMBL; CP001663; AFP37880.1; -; Genomic_DNA.
DR RefSeq; WP_003892830.1; NZ_SIJM01000016.1.
DR RefSeq; YP_885826.1; NC_008596.1.
DR PDB; 5O60; EM; 3.20 A; N=1-138.
DR PDB; 5O61; EM; 3.31 A; N=1-138.
DR PDB; 5XYM; EM; 3.08 A; M=1-138.
DR PDB; 5ZEB; EM; 3.40 A; N=1-138.
DR PDB; 5ZEP; EM; 3.40 A; N=1-138.
DR PDB; 5ZET; EM; 3.20 A; N=1-138.
DR PDB; 6DZI; EM; 3.46 A; N=1-136.
DR PDB; 6DZP; EM; 3.42 A; N=1-138.
DR PDBsum; 5O60; -.
DR PDBsum; 5O61; -.
DR PDBsum; 5XYM; -.
DR PDBsum; 5ZEB; -.
DR PDBsum; 5ZEP; -.
DR PDBsum; 5ZET; -.
DR PDBsum; 6DZI; -.
DR PDBsum; 6DZP; -.
DR AlphaFoldDB; A0QSD8; -.
DR SMR; A0QSD8; -.
DR IntAct; A0QSD8; 3.
DR STRING; 246196.MSMEI_1407; -.
DR PRIDE; A0QSD8; -.
DR EnsemblBacteria; ABK74245; ABK74245; MSMEG_1443.
DR EnsemblBacteria; AFP37880; AFP37880; MSMEI_1407.
DR GeneID; 66732902; -.
DR KEGG; msg:MSMEI_1407; -.
DR KEGG; msm:MSMEG_1443; -.
DR PATRIC; fig|246196.19.peg.1429; -.
DR eggNOG; COG0197; Bacteria.
DR OMA; KGAVEYW; -.
DR OrthoDB; 1786618at2; -.
DR Proteomes; UP000000757; Chromosome.
DR Proteomes; UP000006158; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd01433; Ribosomal_L16_L10e; 1.
DR Gene3D; 3.90.1170.10; -; 1.
DR HAMAP; MF_01342; Ribosomal_L16; 1.
DR InterPro; IPR016180; Ribosomal_L10e/L16.
DR InterPro; IPR036920; Ribosomal_L10e/L16_sf.
DR InterPro; IPR000114; Ribosomal_L16.
DR InterPro; IPR020798; Ribosomal_L16_CS.
DR PANTHER; PTHR12220; PTHR12220; 1.
DR Pfam; PF00252; Ribosomal_L16; 1.
DR PRINTS; PR00060; RIBOSOMALL16.
DR SUPFAM; SSF54686; SSF54686; 1.
DR TIGRFAMs; TIGR01164; rplP_bact; 1.
DR PROSITE; PS00586; RIBOSOMAL_L16_1; 1.
DR PROSITE; PS00701; RIBOSOMAL_L16_2; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding; tRNA-binding.
FT CHAIN 1..138
FT /note="50S ribosomal protein L16"
FT /id="PRO_1000054654"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..15
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT STRAND 22..24
FT /evidence="ECO:0007829|PDB:6DZP"
FT STRAND 29..36
FT /evidence="ECO:0007829|PDB:5XYM"
FT STRAND 40..43
FT /evidence="ECO:0007829|PDB:5XYM"
FT HELIX 44..58
FT /evidence="ECO:0007829|PDB:5XYM"
FT STRAND 64..66
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 72..75
FT /evidence="ECO:0007829|PDB:5ZET"
FT STRAND 79..81
FT /evidence="ECO:0007829|PDB:5XYM"
FT STRAND 94..97
FT /evidence="ECO:0007829|PDB:5XYM"
FT STRAND 102..106
FT /evidence="ECO:0007829|PDB:5XYM"
FT HELIX 112..123
FT /evidence="ECO:0007829|PDB:5XYM"
FT STRAND 125..127
FT /evidence="ECO:0007829|PDB:5XYM"
FT STRAND 129..133
FT /evidence="ECO:0007829|PDB:5XYM"
SQ SEQUENCE 138 AA; 15742 MW; 4ADDA3E2DFACA67E CRC64;
MLIPRKVKHR KQHHPEQRGI ASGGTSVSFG DYGIQALEHA YITNRQIESA RIAINRHIKR
GGKVWINIFP DRPLTKKPAE TRMGSGKGSP EWWVANVKPG RVLFELSYPD EKTARDALTR
AIHKLPIKAR IVTREEQF
