ATPD_SPIOL
ID ATPD_SPIOL Reviewed; 257 AA.
AC P11402;
DT 01-JUL-1989, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1990, sequence version 2.
DT 25-MAY-2022, entry version 107.
DE RecName: Full=ATP synthase delta chain, chloroplastic;
DE AltName: Full=F-ATPase delta chain;
DE Flags: Precursor;
GN Name=ATPD;
OS Spinacia oleracea (Spinach).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia.
OX NCBI_TaxID=3562;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Monatol;
RX PubMed=2194803; DOI=10.1111/j.1432-1033.1990.tb15591.x;
RA Bichler J., Herrmann R.G.;
RT "Analysis of the promotors of the single-copy genes for plastocyanin and
RT subunit delta of the chloroplast ATP synthase from spinach.";
RL Eur. J. Biochem. 190:415-426(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX AGRICOLA=IND92000617; DOI=10.1007/BF00029882;
RA Hermans J., Rother C., Bichler J., Steppuhn J., Herrmann R.G.;
RT "Nucleotide sequence of cDNA clones encoding the complete precursor for
RT subunit delta of thylakoid-located ATP synthase from spinach.";
RL Plant Mol. Biol. 10:323-330(1988).
RN [3]
RP PROTEIN SEQUENCE OF 71-105.
RA Berzborn R.J., Finke W., Otto J., Meyer H.E.;
RT "Protein sequence and structure of N-terminal amino acids of subunit delta
RT of spinach photosynthetic ATP-synthase CF1.";
RL Z. Naturforsch. C 42:1231-1238(1987).
CC -!- FUNCTION: This protein seems to be part of the stalk that links CF(0)
CC to CF(1). It either transmits conformational changes from CF(0) into
CC CF(1) or is implicated in proton conduction.
CC -!- SUBUNIT: F-type ATPases have 2 components, CF(1) - the catalytic core
CC - and CF(0) - the membrane proton channel. CF(1) has five subunits:
CC alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main
CC subunits: a, b and c.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane.
CC -!- SIMILARITY: Belongs to the ATPase delta chain family. {ECO:0000305}.
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DR EMBL; X61362; CAA43634.1; -; Genomic_DNA.
DR EMBL; M21357; AAA34024.1; -; Genomic_DNA.
DR PIR; S11424; PWSPD.
DR PDB; 6FKF; EM; 3.10 A; d=1-257.
DR PDB; 6FKH; EM; 4.20 A; d=1-257.
DR PDB; 6FKI; EM; 4.30 A; d=1-257.
DR PDB; 6VM1; EM; 7.90 A; d=1-257.
DR PDB; 6VM4; EM; 7.08 A; d=1-257.
DR PDB; 6VMB; EM; 5.23 A; d=1-257.
DR PDB; 6VMD; EM; 4.53 A; d=1-257.
DR PDB; 6VMG; EM; 6.46 A; d=1-257.
DR PDB; 6VOF; EM; 4.51 A; d=1-257.
DR PDB; 6VOG; EM; 4.35 A; d=1-257.
DR PDB; 6VOH; EM; 4.16 A; d=1-257.
DR PDB; 6VOI; EM; 4.03 A; d=1-257.
DR PDB; 6VOJ; EM; 4.34 A; d=1-257.
DR PDB; 6VOK; EM; 3.85 A; d=1-257.
DR PDB; 6VOL; EM; 4.06 A; d=1-257.
DR PDB; 6VOM; EM; 3.60 A; d=1-257.
DR PDB; 6VON; EM; 3.35 A; d=1-257.
DR PDB; 6VOO; EM; 3.05 A; d=1-257.
DR PDBsum; 6FKF; -.
DR PDBsum; 6FKH; -.
DR PDBsum; 6FKI; -.
DR PDBsum; 6VM1; -.
DR PDBsum; 6VM4; -.
DR PDBsum; 6VMB; -.
DR PDBsum; 6VMD; -.
DR PDBsum; 6VMG; -.
DR PDBsum; 6VOF; -.
DR PDBsum; 6VOG; -.
DR PDBsum; 6VOH; -.
DR PDBsum; 6VOI; -.
DR PDBsum; 6VOJ; -.
DR PDBsum; 6VOK; -.
DR PDBsum; 6VOL; -.
DR PDBsum; 6VOM; -.
DR PDBsum; 6VON; -.
DR PDBsum; 6VOO; -.
DR AlphaFoldDB; P11402; -.
DR SMR; P11402; -.
DR IntAct; P11402; 1.
DR ChEMBL; CHEMBL2366567; -.
DR OrthoDB; 1432799at2759; -.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0045261; C:proton-transporting ATP synthase complex, catalytic core F(1); IEA:UniProtKB-KW.
DR GO; GO:0046933; F:proton-transporting ATP synthase activity, rotational mechanism; IEA:InterPro.
DR Gene3D; 1.10.520.20; -; 1.
DR HAMAP; MF_01416; ATP_synth_delta_bact; 1.
DR InterPro; IPR026015; ATP_synth_OSCP/delta_N_sf.
DR InterPro; IPR020781; ATPase_OSCP/d_CS.
DR InterPro; IPR000711; ATPase_OSCP/dsu.
DR PANTHER; PTHR11910; PTHR11910; 1.
DR Pfam; PF00213; OSCP; 1.
DR PRINTS; PR00125; ATPASEDELTA.
DR SUPFAM; SSF47928; SSF47928; 1.
DR TIGRFAMs; TIGR01145; ATP_synt_delta; 1.
DR PROSITE; PS00389; ATPASE_DELTA; 1.
PE 1: Evidence at protein level;
KW 3D-structure; ATP synthesis; CF(1); Chloroplast; Direct protein sequencing;
KW Hydrogen ion transport; Ion transport; Membrane; Plastid; Thylakoid;
KW Transit peptide; Transport.
FT TRANSIT 1..70
FT /note="Chloroplast"
FT /evidence="ECO:0000269|Ref.3"
FT CHAIN 71..257
FT /note="ATP synthase delta chain, chloroplastic"
FT /id="PRO_0000002641"
FT CONFLICT 29
FT /note="T -> P (in Ref. 2; AAA34024)"
FT /evidence="ECO:0000305"
FT HELIX 74..89
FT /evidence="ECO:0007829|PDB:6FKF"
FT HELIX 92..106
FT /evidence="ECO:0007829|PDB:6FKF"
FT HELIX 109..116
FT /evidence="ECO:0007829|PDB:6FKF"
FT STRAND 118..120
FT /evidence="ECO:0007829|PDB:6FKF"
FT HELIX 122..136
FT /evidence="ECO:0007829|PDB:6FKF"
FT HELIX 140..151
FT /evidence="ECO:0007829|PDB:6FKF"
FT HELIX 154..157
FT /evidence="ECO:0007829|PDB:6FKF"
FT HELIX 158..173
FT /evidence="ECO:0007829|PDB:6FKF"
FT STRAND 178..184
FT /evidence="ECO:0007829|PDB:6FKF"
FT HELIX 188..202
FT /evidence="ECO:0007829|PDB:6FKF"
FT STRAND 205..207
FT /evidence="ECO:0007829|PDB:6FKF"
FT STRAND 210..213
FT /evidence="ECO:0007829|PDB:6FKF"
FT STRAND 215..217
FT /evidence="ECO:0007829|PDB:6FKF"
FT STRAND 221..225
FT /evidence="ECO:0007829|PDB:6FKF"
FT TURN 226..229
FT /evidence="ECO:0007829|PDB:6FKF"
FT STRAND 231..234
FT /evidence="ECO:0007829|PDB:6FKF"
FT HELIX 238..247
FT /evidence="ECO:0007829|PDB:6FKF"
SQ SEQUENCE 257 AA; 27681 MW; 0D5CAF09258F51C0 CRC64;
MAALQNPVAL QSRTTTAVAA LSTSSTTSTP KPFSLSFSSS TATFNPLRLK ILTASKLTAK
PRGGALGTRM VDSTASRYAS ALADVADVTG TLEATNSDVE KLIRIFSEEP VYYFFANPVI
SIDNKRSVLD EIITTSGLQP HTANFINILI DSERINLVKE ILNEFEDVFN KITGTEVAVV
TSVVKLENDH LAQIAKGVQK ITGAKNVRIK TVIDPSLVAG FTIRYGNEGS KLVDMSVKKQ
LEEIAAQLEM DDVTLAV
