RL18_RHOPA
ID RL18_RHOPA Reviewed; 120 AA.
AC Q6N4U9;
DT 16-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337};
DE AltName: Full=RRP-L18;
GN Name=rplR {ECO:0000255|HAMAP-Rule:MF_01337}; OrderedLocusNames=RPA3234;
OS Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Bradyrhizobiaceae; Rhodopseudomonas.
OX NCBI_TaxID=258594;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-98 / CGA009;
RX PubMed=14704707; DOI=10.1038/nbt923;
RA Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L.,
RA Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R.,
RA Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C.,
RA Harrison F.H., Gibson J., Harwood C.S.;
RT "Complete genome sequence of the metabolically versatile photosynthetic
RT bacterium Rhodopseudomonas palustris.";
RL Nat. Biotechnol. 22:55-61(2004).
RN [2]
RP MASS SPECTROMETRY.
RC STRAIN=ATCC BAA-98 / CGA009;
RX PubMed=15473684; DOI=10.1021/pr049940z;
RA Strader M.B., VerBerkmoes N.C., Tabb D.L., Connelly H.M., Barton J.W.,
RA Bruce B.D., Pelletier D.A., Davison B.H., Hettich R.L., Larimer F.W.,
RA Hurst G.B.;
RT "Characterization of the 70S ribosome from Rhodopseudomonas palustris using
RT an integrated 'top-down' and 'bottom-up' mass spectrometric approach.";
RL J. Proteome Res. 3:965-978(2004).
CC -!- FUNCTION: This is one of the proteins that binds and probably mediates
CC the attachment of the 5S RNA into the large ribosomal subunit, where it
CC forms part of the central protuberance. {ECO:0000255|HAMAP-
CC Rule:MF_01337}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.
CC {ECO:0000255|HAMAP-Rule:MF_01337}.
CC -!- MASS SPECTROMETRY: Mass=12905.2; Method=Electrospray;
CC Evidence={ECO:0000269|PubMed:15473684};
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL18 family.
CC {ECO:0000255|HAMAP-Rule:MF_01337}.
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DR EMBL; BX572603; CAE28675.1; -; Genomic_DNA.
DR RefSeq; WP_011158779.1; NC_005296.1.
DR AlphaFoldDB; Q6N4U9; -.
DR SMR; Q6N4U9; -.
DR IntAct; Q6N4U9; 1.
DR STRING; 258594.RPA3234; -.
DR PRIDE; Q6N4U9; -.
DR EnsemblBacteria; CAE28675; CAE28675; RPA3234.
DR GeneID; 66894320; -.
DR KEGG; rpa:RPA3234; -.
DR eggNOG; COG0256; Bacteria.
DR HOGENOM; CLU_098841_0_1_5; -.
DR OMA; NKQIYAQ; -.
DR PhylomeDB; Q6N4U9; -.
DR BioCyc; RPAL258594:TX73_RS16500-MON; -.
DR Proteomes; UP000001426; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_01337_B; Ribosomal_L18_B; 1.
DR InterPro; IPR005484; Ribosomal_L18.
DR InterPro; IPR004389; Ribosomal_L18_bac-type.
DR PANTHER; PTHR12899; PTHR12899; 1.
DR Pfam; PF00861; Ribosomal_L18p; 1.
DR TIGRFAMs; TIGR00060; L18_bact; 1.
PE 1: Evidence at protein level;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT INIT_MET 1
FT /note="Removed"
FT CHAIN 2..120
FT /note="50S ribosomal protein L18"
FT /id="PRO_0000131329"
SQ SEQUENCE 120 AA; 13037 MW; 8934F1ADC737ACA1 CRC64;
MSKMKITNAR RTNRVRTALR RTANGRPRLS VFRSSKHIYA QVIDDAKGET LASASSLEKT
MRDAGNTGAN IDAAKAVGKL VAERAVEKGV KEVVFDRGGY LYHGRVKALA DAARESGLSF