RL18_SYNJA
ID RL18_SYNJA Reviewed; 122 AA.
AC Q2JV92;
DT 03-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 07-MAR-2006, sequence version 1.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337};
GN Name=rplR {ECO:0000255|HAMAP-Rule:MF_01337};
GN Synonyms=rpl18 {ECO:0000255|HAMAP-Rule:MF_01337};
GN OrderedLocusNames=CYA_1163;
OS Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone
OS A-Prime).
OC Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus;
OC unclassified Synechococcus.
OX NCBI_TaxID=321327;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JA-3-3Ab;
RX PubMed=18059494; DOI=10.1038/ismej.2007.46;
RA Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N.,
RA Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.;
RT "Population level functional diversity in a microbial community revealed by
RT comparative genomic and metagenomic analyses.";
RL ISME J. 1:703-713(2007).
CC -!- FUNCTION: This is one of the proteins that binds and probably mediates
CC the attachment of the 5S RNA into the large ribosomal subunit, where it
CC forms part of the central protuberance. {ECO:0000255|HAMAP-
CC Rule:MF_01337}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.
CC {ECO:0000255|HAMAP-Rule:MF_01337}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL18 family.
CC {ECO:0000255|HAMAP-Rule:MF_01337}.
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DR EMBL; CP000239; ABC99351.1; -; Genomic_DNA.
DR RefSeq; WP_011430032.1; NC_007775.1.
DR AlphaFoldDB; Q2JV92; -.
DR SMR; Q2JV92; -.
DR STRING; 321327.CYA_1163; -.
DR EnsemblBacteria; ABC99351; ABC99351; CYA_1163.
DR KEGG; cya:CYA_1163; -.
DR eggNOG; COG0256; Bacteria.
DR HOGENOM; CLU_098841_0_1_3; -.
DR OMA; NKQIYAQ; -.
DR OrthoDB; 1963491at2; -.
DR Proteomes; UP000008818; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_01337_B; Ribosomal_L18_B; 1.
DR InterPro; IPR005484; Ribosomal_L18.
DR InterPro; IPR004389; Ribosomal_L18_bac-type.
DR PANTHER; PTHR12899; PTHR12899; 1.
DR Pfam; PF00861; Ribosomal_L18p; 1.
DR TIGRFAMs; TIGR00060; L18_bact; 1.
PE 3: Inferred from homology;
KW Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding.
FT CHAIN 1..122
FT /note="50S ribosomal protein L18"
FT /id="PRO_0000251385"
SQ SEQUENCE 122 AA; 13716 MW; 490CA6FD5D90AB77 CRC64;
MKITRKAATQ RRHRRIRRKV FGTPERPRLA VFRSHRHIYA QVIDDVAQHT LVSASTLDRE
LREAFKDIGT ATREAAAVVG RSVAQRALQA GICQVVFDRG GKLYHGRVQA LAEAAREAGL
QF