RL18_THETH
ID RL18_THETH Reviewed; 112 AA.
AC P80320;
DT 01-OCT-1994, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 4.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=50S ribosomal protein L18;
DE AltName: Full=TL24;
GN Name=rplR; Synonyms=rpl18;
OS Thermus thermophilus.
OC Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.
OX NCBI_TaxID=274;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=VK1;
RX PubMed=9249063; DOI=10.1016/s0378-1119(97)00072-3;
RA Vysotskaya V.S., Shcherbakov D.V., Garber M.B.;
RT "Sequencing and analysis of the Thermus thermophilus ribosomal protein gene
RT cluster equivalent to the spectinomycin operon.";
RL Gene 193:23-30(1997).
RN [2]
RP SEQUENCE REVISION TO 58-65.
RC STRAIN=VK1;
RA Shcherbakov D.V.;
RL Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP BINDING TO 5S RRNA.
RC STRAIN=VK1;
RX PubMed=11524947; DOI=10.1023/A:1010562707875;
RA Gongadze G.M., Perederina A.A., Meshcheriakov V.A., Fedorov R.V.,
RA Moskalenko S.E., Rak A.V., Serganov A.A., Shcherbakov D.V., Nikonov S.V.,
RA Garber M.B.;
RT "The Thermus thermophilus 5S rRNA-protein complex: identification of
RT specific binding sites for proteins L5 and L18 in 5S rRNA.";
RL Mol. Biol. (Mosk.) 35:610-616(2001).
RN [4]
RP STRUCTURE BY NMR.
RX PubMed=10959636; DOI=10.1023/a:1008319622724;
RA Woestenenk E.A., Allard P., Gongadze G.M., Moskalenko S.E.,
RA Shcherbakov D.V., Rak A.V., Garber M.B., Haerd T., Berglund H.;
RT "Letter to the editor: assignment and secondary structure identification of
RT the ribosomal protein L18 from Thermus thermophilus.";
RL J. Biomol. NMR 17:273-274(2000).
RN [5]
RP STRUCTURE BY NMR OF 23-112.
RX PubMed=11964156; DOI=10.1042/0264-6021:3630553;
RA Woestenenk E.A., Gongadze G.M., Shcherbakov D.V., Rak A.V., Garber M.B.,
RA Haerd T., Berglund H.;
RT "The solution structure of ribosomal protein L18 from Thermus thermophilus
RT reveals a conserved RNA-binding fold.";
RL Biochem. J. 363:553-561(2002).
CC -!- FUNCTION: This is one of the proteins that binds and probably mediates
CC the attachment of the 5S RNA into the large ribosomal subunit, where it
CC forms part of the central protuberance. {ECO:0000250}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC rRNA/L5/L18/L25 subcomplex. Contacts the 5S and probably the 23S rRNA;
CC has been isolated as a complex with the 5S rRNA and L5
CC (PubMed:11524947). {ECO:0000269|PubMed:11524947}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL18 family.
CC {ECO:0000305}.
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DR EMBL; X90765; CAA62289.2; -; Genomic_DNA.
DR RefSeq; WP_008633391.1; NZ_VHHQ01000024.1.
DR PDB; 1ILY; NMR; -; A=23-112.
DR PDBsum; 1ILY; -.
DR AlphaFoldDB; P80320; -.
DR BMRB; P80320; -.
DR SMR; P80320; -.
DR GeneID; 3169978; -.
DR OMA; NKQIYAQ; -.
DR EvolutionaryTrace; P80320; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_01337_B; Ribosomal_L18_B; 1.
DR InterPro; IPR005484; Ribosomal_L18.
DR InterPro; IPR004389; Ribosomal_L18_bac-type.
DR PANTHER; PTHR12899; PTHR12899; 1.
DR Pfam; PF00861; Ribosomal_L18p; 1.
DR TIGRFAMs; TIGR00060; L18_bact; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250"
FT CHAIN 2..112
FT /note="50S ribosomal protein L18"
FT /id="PRO_0000131373"
FT STRAND 25..30
FT /evidence="ECO:0007829|PDB:1ILY"
FT STRAND 35..41
FT /evidence="ECO:0007829|PDB:1ILY"
FT TURN 42..45
FT /evidence="ECO:0007829|PDB:1ILY"
FT STRAND 46..52
FT /evidence="ECO:0007829|PDB:1ILY"
FT HELIX 53..56
FT /evidence="ECO:0007829|PDB:1ILY"
FT HELIX 66..79
FT /evidence="ECO:0007829|PDB:1ILY"
FT HELIX 96..108
FT /evidence="ECO:0007829|PDB:1ILY"
SQ SEQUENCE 112 AA; 12612 MW; EA2AB016AEDB0638 CRC64;
MARLTAYERR KFRVRNRIKR TGRLRLSVFR SLKHIYAQII DDEKGVTLVS ASSLALKLKG
NKTEVARQVG RALAEKALAL GIKQVAFDRG PYKYHGRVKA LAEGAREGGL EF