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RL1_HALVD
ID   RL1_HALVD               Reviewed;         212 AA.
AC   P41199; D4GWC2;
DT   01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT   21-SEP-2011, sequence version 3.
DT   25-MAY-2022, entry version 96.
DE   RecName: Full=50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318};
GN   Name=rpl1 {ECO:0000255|HAMAP-Rule:MF_01318}; OrderedLocusNames=HVO_2757;
OS   Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 /
OS   NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Haloferacales;
OC   Haloferacaceae; Haloferax.
OX   NCBI_TaxID=309800;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM
RC   B-1768 / DS2;
RX   PubMed=8755911; DOI=10.1128/jb.178.15.4737-4741.1996;
RA   Shimmin L.C., Dennis P.P.;
RT   "Conserved sequence elements involved in regulation of ribosomal protein
RT   gene expression in halophilic archaea.";
RL   J. Bacteriol. 178:4737-4741(1996).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM
RC   B-1768 / DS2;
RX   PubMed=20333302; DOI=10.1371/journal.pone.0009605;
RA   Hartman A.L., Norais C., Badger J.H., Delmas S., Haldenby S., Madupu R.,
RA   Robinson J., Khouri H., Ren Q., Lowe T.M., Maupin-Furlow J.,
RA   Pohlschroder M., Daniels C., Pfeiffer F., Allers T., Eisen J.A.;
RT   "The complete genome sequence of Haloferax volcanii DS2, a model
RT   archaeon.";
RL   PLoS ONE 5:E9605-E9605(2010).
CC   -!- FUNCTION: Binds directly to 23S rRNA. Probably involved in E site tRNA
CC       release. {ECO:0000255|HAMAP-Rule:MF_01318}.
CC   -!- FUNCTION: Protein L1 is also a translational repressor protein, it
CC       controls the translation of its operon by binding to its mRNA.
CC       {ECO:0000255|HAMAP-Rule:MF_01318}.
CC   -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC       Rule:MF_01318}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL1 family.
CC       {ECO:0000255|HAMAP-Rule:MF_01318}.
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DR   EMBL; X58924; CAA41723.1; -; Genomic_DNA.
DR   EMBL; CP001956; ADE03446.1; -; Genomic_DNA.
DR   PIR; S34135; S34135.
DR   RefSeq; WP_004043003.1; NZ_AOHU01000047.1.
DR   AlphaFoldDB; P41199; -.
DR   SMR; P41199; -.
DR   IntAct; P41199; 15.
DR   STRING; 309800.C498_09074; -.
DR   EnsemblBacteria; ADE03446; ADE03446; HVO_2757.
DR   GeneID; 8924047; -.
DR   KEGG; hvo:HVO_2757; -.
DR   eggNOG; arCOG04289; Archaea.
DR   HOGENOM; CLU_062853_4_0_2; -.
DR   OMA; GWTDVDV; -.
DR   OrthoDB; 70269at2157; -.
DR   Proteomes; UP000008243; Chromosome.
DR   GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   CDD; cd00403; Ribosomal_L1; 1.
DR   Gene3D; 3.40.50.790; -; 1.
DR   HAMAP; MF_01318_A; Ribosomal_L1_A; 1.
DR   InterPro; IPR002143; Ribosomal_L1.
DR   InterPro; IPR023674; Ribosomal_L1-like.
DR   InterPro; IPR028364; Ribosomal_L1/biogenesis.
DR   InterPro; IPR016095; Ribosomal_L1_3-a/b-sand.
DR   InterPro; IPR023669; Ribosomal_L1_arc.
DR   InterPro; IPR023673; Ribosomal_L1_CS.
DR   Pfam; PF00687; Ribosomal_L1; 1.
DR   PIRSF; PIRSF002155; Ribosomal_L1; 1.
DR   SUPFAM; SSF56808; SSF56808; 1.
DR   PROSITE; PS01199; RIBOSOMAL_L1; 1.
PE   3: Inferred from homology;
KW   Reference proteome; Repressor; Ribonucleoprotein; Ribosomal protein;
KW   RNA-binding; rRNA-binding; Translation regulation; tRNA-binding.
FT   INIT_MET        1
FT                   /note="Removed"
FT                   /evidence="ECO:0000250"
FT   CHAIN           2..212
FT                   /note="50S ribosomal protein L1"
FT                   /id="PRO_0000125796"
FT   CONFLICT        69..70
FT                   /note="Missing (in Ref. 1; CAA41723)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   212 AA;  23130 MW;  765F0C7221D93758 CRC64;
     MADTIVDAVS RALDEAPGRN FRETVDLAVN LRDLDLNDPS KRVDESIVLP SGTGQDTQIV
     VFATGETALR AEDAADEVLG PDELEDFGDD TDAAKDLADE TDFFVAEAGL MQDIGRYLGT
     VLGPRGKMPT PLQPDDDVVE TVNRMKNTVQ LRSRDRRTFH TRVGADDMTP DEIAENIDVI
     VRRLEATLEK GPLNIDSVYV KTTMGPSVEV PA
 
 
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