RL20_SYNJA
ID RL20_SYNJA Reviewed; 118 AA.
AC Q2JR49;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 07-MAR-2006, sequence version 1.
DT 25-MAY-2022, entry version 79.
DE RecName: Full=50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382};
GN Name=rplT {ECO:0000255|HAMAP-Rule:MF_00382};
GN Synonyms=rpl20 {ECO:0000255|HAMAP-Rule:MF_00382};
GN OrderedLocusNames=CYA_2812;
OS Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone
OS A-Prime).
OC Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus;
OC unclassified Synechococcus.
OX NCBI_TaxID=321327;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JA-3-3Ab;
RX PubMed=18059494; DOI=10.1038/ismej.2007.46;
RA Bhaya D., Grossman A.R., Steunou A.-S., Khuri N., Cohan F.M., Hamamura N.,
RA Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.;
RT "Population level functional diversity in a microbial community revealed by
RT comparative genomic and metagenomic analyses.";
RL ISME J. 1:703-713(2007).
CC -!- FUNCTION: Binds directly to 23S ribosomal RNA and is necessary for the
CC in vitro assembly process of the 50S ribosomal subunit. It is not
CC involved in the protein synthesizing functions of that subunit.
CC {ECO:0000255|HAMAP-Rule:MF_00382}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL20 family.
CC {ECO:0000255|HAMAP-Rule:MF_00382}.
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DR EMBL; CP000239; ABD00914.1; -; Genomic_DNA.
DR RefSeq; WP_011431584.1; NC_007775.1.
DR AlphaFoldDB; Q2JR49; -.
DR SMR; Q2JR49; -.
DR STRING; 321327.CYA_2812; -.
DR EnsemblBacteria; ABD00914; ABD00914; CYA_2812.
DR KEGG; cya:CYA_2812; -.
DR eggNOG; COG0292; Bacteria.
DR HOGENOM; CLU_123265_0_1_3; -.
DR OMA; GRRKNVW; -.
DR OrthoDB; 1932144at2; -.
DR Proteomes; UP000008818; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0000027; P:ribosomal large subunit assembly; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd07026; Ribosomal_L20; 1.
DR Gene3D; 1.10.1900.20; -; 1.
DR HAMAP; MF_00382; Ribosomal_L20; 1.
DR InterPro; IPR005813; Ribosomal_L20.
DR InterPro; IPR035566; Ribosomal_protein_L20_C.
DR PANTHER; PTHR10986; PTHR10986; 1.
DR Pfam; PF00453; Ribosomal_L20; 1.
DR PRINTS; PR00062; RIBOSOMALL20.
DR SUPFAM; SSF74731; SSF74731; 1.
DR TIGRFAMs; TIGR01032; rplT_bact; 1.
DR PROSITE; PS00937; RIBOSOMAL_L20; 1.
PE 3: Inferred from homology;
KW Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding.
FT CHAIN 1..118
FT /note="50S ribosomal protein L20"
FT /id="PRO_0000243749"
SQ SEQUENCE 118 AA; 13759 MW; 5F3684E645FDE1B5 CRC64;
MRVKRGNVAR KRRKKILKLA KGFRGAGSKL FRTANQQVMK ALRSAYRDRR RKKRDFRRLW
IARINAATRA QGLRYSEFID GLKKGNIQLN RKMLARLAFL DPEAFTQVVE AARQARAS