RL20_VIBCH
ID RL20_VIBCH Reviewed; 117 AA.
AC P0A479; O68846; Q9KMN6;
DT 01-MAR-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2005, sequence version 1.
DT 03-AUG-2022, entry version 84.
DE RecName: Full=50S ribosomal protein L20;
GN Name=rplT; OrderedLocusNames=VC_A0290;
OS Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=243277;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=9554855; DOI=10.1126/science.280.5363.605;
RA Mazel D., Dychinco B., Webb V.A., Davies J.;
RT "A distinctive class of integron in the Vibrio cholerae genome.";
RL Science 280:605-608(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Clark C.A., Manning P.A.;
RT "The Vibrio cholerea mega-integron.";
RL Submitted (AUG-1999) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 39315 / El Tor Inaba N16961;
RX PubMed=10952301; DOI=10.1038/35020000;
RA Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L.,
RA Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., Gill S.R.,
RA Nelson K.E., Read T.D., Tettelin H., Richardson D.L., Ermolaeva M.D.,
RA Vamathevan J.J., Bass S., Qin H., Dragoi I., Sellers P., McDonald L.A.,
RA Utterback T.R., Fleischmann R.D., Nierman W.C., White O., Salzberg S.L.,
RA Smith H.O., Colwell R.R., Mekalanos J.J., Venter J.C., Fraser C.M.;
RT "DNA sequence of both chromosomes of the cholera pathogen Vibrio
RT cholerae.";
RL Nature 406:477-483(2000).
CC -!- FUNCTION: Binds directly to 23S ribosomal RNA and is necessary for the
CC in vitro assembly process of the 50S ribosomal subunit. It is not
CC involved in the protein synthesizing functions of that subunit (By
CC similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL20 family.
CC {ECO:0000305}.
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DR EMBL; AF055586; AAC38423.1; -; Genomic_DNA.
DR EMBL; AF179591; AAD53322.1; -; Genomic_DNA.
DR EMBL; AE003853; AAF96198.1; -; Genomic_DNA.
DR PIR; B82476; B82476.
DR RefSeq; NP_232686.1; NC_002506.1.
DR RefSeq; WP_001138366.1; NZ_LT906615.1.
DR AlphaFoldDB; P0A479; -.
DR SMR; P0A479; -.
DR STRING; 243277.VC_A0290; -.
DR DNASU; 2611990; -.
DR EnsemblBacteria; AAF96198; AAF96198; VC_A0290.
DR GeneID; 57835831; -.
DR KEGG; vch:VC_A0290; -.
DR PATRIC; fig|243277.26.peg.2925; -.
DR eggNOG; COG0292; Bacteria.
DR HOGENOM; CLU_123265_0_1_6; -.
DR OMA; GRRKNVW; -.
DR BioCyc; VCHO:VCA0290-MON; -.
DR Proteomes; UP000000584; Chromosome 2.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0000027; P:ribosomal large subunit assembly; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd07026; Ribosomal_L20; 1.
DR Gene3D; 1.10.1900.20; -; 1.
DR HAMAP; MF_00382; Ribosomal_L20; 1.
DR InterPro; IPR005813; Ribosomal_L20.
DR InterPro; IPR035566; Ribosomal_protein_L20_C.
DR PANTHER; PTHR10986; PTHR10986; 1.
DR Pfam; PF00453; Ribosomal_L20; 1.
DR PRINTS; PR00062; RIBOSOMALL20.
DR SUPFAM; SSF74731; SSF74731; 1.
DR TIGRFAMs; TIGR01032; rplT_bact; 1.
DR PROSITE; PS00937; RIBOSOMAL_L20; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..117
FT /note="50S ribosomal protein L20"
FT /id="PRO_0000177258"
FT CONFLICT 29
FT /note="S -> P (in Ref. 1 and 2)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 117 AA; 13366 MW; CDC21B661745375D CRC64;
MPRVKRGVQA RARHKKVLKQ AKGYYGARSR VYRVAFQAVI KAGQYAYRDR RAKKRQFRQL
WIARINAAAR QNGLSYSRFI NGLKKASIEI DRKILADIAV FDKAAFAVLV EKAKGAL