RL21_RUEPO
ID RL21_RUEPO Reviewed; 193 AA.
AC Q5LRY0;
DT 09-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363};
GN Name=rplU {ECO:0000255|HAMAP-Rule:MF_01363}; OrderedLocusNames=SPO1990;
OS Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter
OS pomeroyi).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Ruegeria.
OX NCBI_TaxID=246200;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700808 / DSM 15171 / DSS-3;
RX PubMed=15602564; DOI=10.1038/nature03170;
RA Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.M.,
RA Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E., Sheldon W.M.,
RA Ye W., Miller T.R., Carlton J., Rasko D.A., Paulsen I.T., Ren Q.,
RA Daugherty S.C., DeBoy R.T., Dodson R.J., Durkin A.S., Madupu R.,
RA Nelson W.C., Sullivan S.A., Rosovitz M.J., Haft D.H., Selengut J., Ward N.;
RT "Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine
RT environment.";
RL Nature 432:910-913(2004).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=ATCC 700808 / DSM 15171 / DSS-3;
RX PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA Rivers A.R., Smith C.B., Moran M.A.;
RT "An updated genome annotation for the model marine bacterium Ruegeria
RT pomeroyi DSS-3.";
RL Stand. Genomic Sci. 9:11-11(2014).
CC -!- FUNCTION: This protein binds to 23S rRNA in the presence of protein
CC L20. {ECO:0000255|HAMAP-Rule:MF_01363}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. Contacts protein L20.
CC {ECO:0000255|HAMAP-Rule:MF_01363}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL21 family.
CC {ECO:0000255|HAMAP-Rule:MF_01363}.
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DR EMBL; CP000031; AAV95266.1; -; Genomic_DNA.
DR RefSeq; WP_011047721.1; NC_003911.12.
DR AlphaFoldDB; Q5LRY0; -.
DR SMR; Q5LRY0; -.
DR STRING; 246200.SPO1990; -.
DR EnsemblBacteria; AAV95266; AAV95266; SPO1990.
DR KEGG; sil:SPO1990; -.
DR eggNOG; COG0261; Bacteria.
DR eggNOG; COG3743; Bacteria.
DR HOGENOM; CLU_061463_1_0_5; -.
DR OMA; TRYERRN; -.
DR OrthoDB; 1949059at2; -.
DR Proteomes; UP000001023; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_01363; Ribosomal_L21; 1.
DR InterPro; IPR010995; DNA_repair_Rad51/TF_NusA_a-hlx.
DR InterPro; IPR036164; L21-like_sf.
DR InterPro; IPR028909; L21p-like.
DR InterPro; IPR001787; Ribosomal_L21.
DR PANTHER; PTHR21349; PTHR21349; 1.
DR Pfam; PF00829; Ribosomal_L21p; 1.
DR SUPFAM; SSF141091; SSF141091; 1.
DR SUPFAM; SSF47794; SSF47794; 1.
DR TIGRFAMs; TIGR00061; L21; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..193
FT /note="50S ribosomal protein L21"
FT /id="PRO_0000270735"
SQ SEQUENCE 193 AA; 19767 MW; 4C4A779D71ED68E8 CRC64;
MFAVLKTGGK QYKVQAGDVL RVEKLAADAG EKVQFNDVLM LGGDAPVVGA PLVDGAAVQA
EVIDQIKGEK LIHFVKRRRK HSSQRTKGHR QKLTLVRITE ILTSGADKTG VKAATGQAAA
GAAAPAAAAP AAAGSDDLTK ITGVGPAAAK KLVEAGIGSF AALAALSDEQ IAAIDAVKVK
PEWVEQAKEL AQG